Gene_Locus Report

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Gene_locus Report for: yerpe-BIOH

Yersinia pestis, Yersinia pseudotuberculosis, putative biotin biosynthesis protein

Comment
other strains: Yersinia pestis (strains D106004; D182038; CA88-4125; KIM D27; biovars Pestoides F Orientalis PEXU2; F1991016; Antiqua Nepal516, B42003004, E1979001, UG05-0454; Orientalis IP275,India 195, MG05-1020; Mediaevalis K1973002; Pestoides A) and Yersinia pseudotuberculosis (and biovar Antiqua strain Antiqua)(biovar Antiqua strain Nepal516) (serotype O:1/IP 31758; serotype IB/strain PB1/+; bv. Antiqua/strain Angola; serotype O:3/strain YPIII) Q74Y45 for biovar Medievalis str. 91001


Relationship
Family|BioH
Block| X
Position in NCBI Life Tree|Yersinia pestis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Enterobacterales: N E > Yersiniaceae: N E > Yersinia: N E > Yersinia pseudotuberculosis complex: N E > Yersinia pestis: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: yerpe-BIOH
Colored MSA for BioH (raw)
MKQLYWYTCGEGDCDLVLLHGWGLNSGVWHCIIDRLAPHFRLHLVDLPGY
GRSQDYGAMSLADMAERVAQQAPKQALWLGWSMGGLVASQIALSQPECVR
GLITVSSSPCFTARDEWPGIKPEVLAGFQHQLSDDFHRTVERFLALQTLG
TESSRQDARLLKSVVLQHQMPDVEVLTGGLAILRTADLRTALAGFTLPFM
RVYGHLDSLVPRKVASLLDSAWPQTQSVVMQGAAHAPFISHPNDFAKLIL
NFAEENKK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MKQLYWYTCGEGDCDLVLLHGWGLNSGVWHCIIDRLAPHFRLHLVDLPGY
GRSQDYGAMSLADMAERVAQQAPKQALWLGWSMGGLVASQIALSQPECVR
GLITVSSSPCFTARDEWPGIKPEVLAGFQHQLSDDFHRTVERFLALQTLG
TESSRQDARLLKSVVLQHQMPDVEVLTGGLAILRTADLRTALAGFTLPFM
RVYGHLDSLVPRKVASLLDSAWPQTQSVVMQGAAHAPFISHPNDFAKLIL
NFAEENKK


References
6 more
    Title: Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis
    Chain PS, Carniel E, Larimer FW, Lamerdin J, Stoutland PO, Regala WM, Georgescu AM, Vergez LM, Land ML and Garcia E <13 more author(s)>
    Ref: Proc Natl Acad Sci U S A, 101:13826, 2004 : PubMed

            

    Title: Genome sequence of Yersinia pestis KIM
    Deng W, Burland V, Plunkett G, 3rd, Boutin A, Mayhew GF, Liss P, Perna NT, Rose DJ, Mau B and Perry RD <11 more author(s)>
    Ref: Journal of Bacteriology, 184:4601, 2002 : PubMed

            

    Title: Genome sequence of Yersinia pestis, the causative agent of plague.
    Parkhill J, Wren BW, Thomson NR, Titball RW, Holden MTG, Prentice MB, Sebaihia M, James KD, Churcher C and Barrell BG <25 more author(s)>
    Ref: Nature, 413:523, 2001 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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