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Paper Report for: Martinez-Martinez_2018_ACS.Chem.Biol_13_225

Reference

Title: Determinants and prediction of esterase substrate promiscuity patterns
Martinez-Martinez M, Coscolin C, Santiago G, Chow J, Stogios PJ, Bargiela R, Gertler C, Navarro-Fernandez J, Bollinger A and Ferrer M <32 more author(s)>
Ref: ACS Chemical Biology, 13:225, 2018 : PubMed

        



Comment
A list of the 122 alpha/beta hydrolases used in this work ordered according to substrate promiscuity is available : LIST. The 22 other enzymes used in this work belong to Family_II (SGNH hydrolase superfamily ex.EH102), Family_VIII (Beta lactamase) or Patatin/FabD/lysophospholipase-like superfamily


Related information

Gene_Locus| 9zzzz-a0a2k8jn75, 9zzzz-a0a2k8jt94, 9zzzz-a0a0g3fj44, 9zzzz-a0a0g3fh10, 9zzzz-a0a0g3fh03, 9bact-a0a1s5qkj8, 9zzzz-a0a0g3feh5, 9zzzz-a0a0g3fkz4, 9zzzz-a0a0g3fh07, 9zzzz-a0a0g3fh34, 9zzzz-a0a0g3fh31, 9bact-KY458167, alcbs-q0vqa3, 9bact-a0a1s5qki8, 9zzzz-a0a0g3feq8, 9zzzz-a0a0g3feh8, 9zzzz-a0a0g3fh19, 9bact-KY203037, 9bact-a0a1s5ql22, 9bact-a0a1s5qm34, 9bact-KY203034, 9bact-r9qzg0, 9bact-a0a1s5qly8, 9zzzz-a0a0g3fkz8, 9zzzz-a0a0g3feg9, 9zzzz-KY203033, 9zzzz-a0a0g3fes4, 9zzzz-a0a0g3fh42, 9bact-a0a1s5qlx2, 9zzzz-KY483651, 9bact-a0a1s5qmh4, 9zzzz-KY203032, 9zzzz-EH87, 9zzzz-a0a0g3fei1, 9zzzz-a0a0g3fet2, 9zzzz-KY483647, 9zzzz-EH82, 9zzzz-a0a0g3fe15, 9bact-KY203031, 9bact-t1w006, 9zzzz-a0a0g3fet6, 9bact-KY458164, geoth-g8myf3, 9bact-a0a1s5ql04, 9gamm-a0a1y0ihk7, 9bact-a0a1s5qly6, 9bact-a0a1s5qkg4, 9bact-a0a1s5qkm4, 9gamm-s5tv80, 9gamm-a0a0c4zhg2, 9zzzz-t1b379, 9gamm-KY483646, 9bact-KY458160, 9zzzz-a0a0g3fj57, 9gamm-s5t8349, 9arch-KY203036, 9bact-KY458168, 9zzzz-a0a0g3fes0, 9zzzz-t1be47, 9bact-KY458159, 9zzzz-a0a0g3fh39, 9bact-t1vzd5, 9prot-EH41, 9bact-Lip114, alcbs-q0vt77, 9bact-a0a1s5qke6, 9bact-a0a1s5qkf3, 9prot-SRP030024, 9gamm-s5t532, 9bact-a0a1s5qkl2, 9bact-a0a1s5qkk8, 9zzzz-KY203030, 9zzzz-t1d4I7, 9prot-KY019260, 9bact-a0a1s5qm38, 9arch-KY458161, 9prot-KY010302, 9zzzz-a0a0g3fl25, 9actn-KY010298, 9gamm-s5u059, 9bact-a0a1s5qmi7, 9bact-KY010297, 9bact-KY483642, 9bact-a0a1s5qkj1, 9bact-KY010299, 9bact-KY483648, alcbs-q0vtl7, 9bact-a0a1s5qf1, 9bact-a0a1s5qkg0, 9bact-a0a0h4tgu6, 9bact-MilE3, 9bact-LAE6, 9alte-MGS-MT1, 9bact-r9qzf7, 9gamm-k0c6t6, alcbs-q0vl36, alcbs-q0vlq1, alcbs-q0vq49, bacsu-pnbae, canar-LipB, canan-lipasA, geost-lipas, marav-a1u5n0, pseps-i7k8x5, staep-GEHD, symth-q67mr3, altma-s5cfn7, cycsp-k0c2b8, alcbs-q0vlk5, 9bact-k7qe48, 9bact-MGS-M1, 9bact-MGS-M2, 9bact-a0a0b5kns5, 9zzzz-a0a0g3fej4, 9zzzz-a0a0g3fj60, 9zzzz-a0a0g3fej0, 9zzzz-a0a0g3fj64, 9bact-a0a0b5kc16, 9zzzz-a0a0g3feg6, 9zzzz-a0a0g3feu6
Substrate | Glucose-pentaacetate, Methyl-salicylate, Methyl-ferulate, 1-Naphtylbutyrate, Pentadecylacetate, Dodecylacetate, Octylacetate, Hexylacetate, 1-Naphtylacetate, Methyl-cinnamate, Methyl-2,5-dihydroxycinnamate, Isobutyl-cinnamate, Phenethyl-cinnamate, Propyl-hexanoate, Propyl-butyrate, Propyl-propionate, Methyl-oleate, Methyl-decanoate, Benzyl-2-hydroxy-3-phenylpropanoate, Methyl-3-hydroxypentanoate, Diethyl-phthalate, Methyl-3-hydroxybenzoate, Benzylparaben, Butylparaben, Propylparaben, Menthylacetate, BFPME, Methyl(S)-3-hydroxybutyrate, Ethyl-lactate, Ethyl-4-chloro-3-hydroxybutanoate, Methyl-mandelate, N-Benzyl-D-proline-ethylester, N-Benzyl-L-proline-ethylester, (1S)-(-)-Menthylacetate, (1R)-(-)-Menthylacetate, Methylbenzoate, Ethylbenzoate, Ethylmyristate, Ethyldodecanoate, Ethyldecanoate, Ethyloctanoate, Ethylbutyrate, Ethylpropionate, Ethylacetate, Methyl-octanoate, Methyl-myristate, Methyl-dodecanoate, Methyl-hexanoate, Methyl-butyrate, Phenylpropionate, Phenylacetate, Tributyrin, Tripropionin, Triacetin, Trilaurin, Triolein, Trioctanoin, Methyl-L-lactate, Methyl-D-lactate, DDPDPDC, 2,4-Dichlorobenzyl-2,4-dichlorobenzoate, 2,4-Dichlorophenyl-2,4-dichlorobenzoate, Pentyl-benzoate, Cyclohexyl-butyrate, Ethyl-2-chlorobenzoate, D-Pantolactone, L-Pantolactone, Methyl-glycolate, gamma-Valerolactone, Ethyl-propionylacetate, Ethyl-acetoacetate, Ethyl-3-oxohexanoate, Ethyl-2-methylacetoacetate, Ethyl-2-ethylacetoacetate, 3-Methyl-3-butenyl-acetate, Geranyl-acetate, Vinyl-acrylate, Vinyl-crotonate, Vinyl-benzoate, Vinyl-oleate, Vinyl-palmitate, Vinyl-myristate, Vinyl-laurate, Vinyl-propionate, Vinyl-acetate, Vinyl-butyrate,


Citations formats

Martinez-Martinez M, Coscolin C, Santiago G, Chow J, Stogios PJ, Bargiela R, Gertler C, Navarro-Fernandez J, Bollinger A, Thies S, Mendez-Garcia C, Popovic A, Brown G, Chernikova TN, Garcia-Moyano A, Bjergah GE, Perez-Garcia P, Hai T, Del Pozo MV, Stokke R, Steen IH, Cui H, Xu X, Nocek BP, Alcaide M, Distaso M, Mesa V, Pelaez AI, Sanchez J, Buchholz PCF, Pleiss J, Fernandez-Guerra A, Glockner FO, Golyshina OV, Yakimov MM, Savchenko A, Jaeger KE, Yakunin AF, Streit WR, Golyshin PN, Guallar V, Ferrer M (2018)
Determinants and prediction of esterase substrate promiscuity patterns
ACS Chemical Biology 13: 225-234

Martinez-Martinez M, Coscolin C, Santiago G, Chow J, Stogios PJ, Bargiela R, Gertler C, Navarro-Fernandez J, Bollinger A, Thies S, Mendez-Garcia C, Popovic A, Brown G, Chernikova TN, Garcia-Moyano A, Bjergah GE, Perez-Garcia P, Hai T, Del Pozo MV, Stokke R, Steen IH, Cui H, Xu X, Nocek BP, Alcaide M, Distaso M, Mesa V, Pelaez AI, Sanchez J, Buchholz PCF, Pleiss J, Fernandez-Guerra A, Glockner FO, Golyshina OV, Yakimov MM, Savchenko A, Jaeger KE, Yakunin AF, Streit WR, Golyshin PN, Guallar V, Ferrer M (2018)
ACS Chemical Biology 13: 225-234



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