Tree Display

AceDB Schema

XML Display

Feedback

Tax_name Report for: Rhodobacteraceae

1176 Alpha/beta hydrolase fold proteins are known to date in Rhodobacteraceae. 20 fragments are known to date
Contains these species Actibacterium atlanticum/ Actibacterium mucosum KCTC 23349/ Aestuariivita atlantica/ Ahrensia marina/ Ahrensia sp./ Ahrensia sp. R2A130/ Albidovulum xiamenense/ Albimonas donghaensis/ Albimonas pacifica/ Aliiroseovarius crassostreae/ Aliiroseovarius sediminilitoris/ Aliishimia ponticola/ Amylibacter kogurei/ Antarctobacter heliothermus/ Boseongicola aestuarii/ Brevirhabdus pacifica/ Candidatus Rhodobacter lobularis/ Celeribacter baekdonensis B30/ Celeribacter halophilus/ Celeribacter indicus/ Citreicella sp. 357/ Citreicella sp. SE45/ Cognatishimia maritima/ Cognatiyoonia koreensis/ Cognatiyoonia sediminum/ Confluentimicrobium lipolyticum/ Cribrihabitans marinus/ Defluviimonas alba/ Defluviimonas sp. 20V17/ Dinoroseobacter shibae/ Dinoroseobacter shibae DFL 12/ Dinoroseobacter shibae DFL 12 = DSM 16493/ Donghicola sp./ Donghicola sp. KarMa/ Epibacterium mobile F1926/ Epibacterium multivorans/ Flavimaricola marinus/ Gemmobacter megaterium/ Haematobacter massiliensis/ Haematobacter missouriensis/ Halocynthiibacter arcticus/ Jannaschia aquimarina/ Jannaschia donghaensis/ Jannaschia faecimaris/ Jannaschia helgolandensis/ Jannaschia pohangensis/ Jannaschia rubra/ Jannaschia seosinensis/ Jannaschia sp./ Jannaschia sp. CCS1/ Jhaorihella thermophila/ Ketogulonicigenium robustum/ Ketogulonicigenium vulgare/ Ketogulonicigenium vulgare WSH-001/ Ketogulonicigenium vulgare Y25/ Labrenzia aggregata/ Labrenzia aggregata IAM 12614/ Labrenzia alba/ Labrenzia alexandrii/ Labrenzia alexandrii DFL-11/ Labrenzia sp./ Labrenzia sp. C1B10/ Labrenzia sp. C1B70/ Labrenzia sp. OB1/ Labrenzia sp. VG12/ Leisingera aquaemixtae/ Leisingera methylohalidivorans DSM 14336/ Leisingera sp./ Leisingera sp. ANG-M1/ Leisingera sp. ANG-M7/ Leisingera sp. ANG-Vp/ Leisingera sp. ANG1/ Leisingera sp. JC1/ Lentibacter algarum/ Limimaricola cinnabarinus LL-001/ Limimaricola hongkongensis DSM 17492/ Litoreibacter albidus/ Litoreibacter arenae DSM 19593/ Litoreibacter ascidiaceicola/ Litoreibacter janthinus/ Loktanella cinnabarina LL-001/ Loktanella hongkongensis DSM 17492/ Loktanella salsilacus/ Loktanella sediminum/ Loktanella sp./ Loktanella sp. 1ANDIMAR09/ Loktanella sp. S4079/ Loktanella vestfoldensis SKA53/ Lutimaribacter pacificus/ Lutimaribacter saemankumensis/ Maliponia aquimaris/ Mameliella alba/ Maribius salinus/ Marinibacterium profundimaris/ Marinosulfonomonas sp./ Marinosulfonomonas sp. PRT-SC04/ Marinovum algicola DG 898/ Maritimibacter alkaliphilus/ Maritimibacter alkaliphilus HTCC2654/ Maritimibacter sp./ Maritimibacter sp. HL-12/ Marivita cryptomonadis/ Marivita geojedonensis/ Marivita hallyeonensis/ Marivivens niveibacter/ Monaibacterium marinum/ Nereida ignava/ Nesiotobacter exalbescens/ Oceanibulbus indolifex HEL-45/ Oceanicella actignis/ Oceanicola batsensis HTCC2597/ Oceanicola granulosus HTCC2516/ Oceanicola litoreus/ Oceanicola sp. 22II-S11g/ Oceaniovalibus guishaninsula/ Oceaniovalibus guishaninsula JLT2003/ Octadecabacter antarcticus/ Octadecabacter antarcticus 238/ Octadecabacter antarcticus 307/ Octadecabacter arcticus/ Octadecabacter arcticus 238/ Octadecabacter temperatus/ Paenirhodobacter enshiensis/ Pannonibacter indicus/ Paracoccus aminophilus JCM 7686/ Paracoccus contaminans/ Paracoccus denitrificans/ Paracoccus denitrificans PD1222/ Paracoccus halophilus/ Paracoccus kondratievae/ Paracoccus marcusii/ Paracoccus pantotrophus/ Paracoccus sanguinis/ Paracoccus seriniphilus/ Paracoccus sp./ Paracoccus sp. 228/ Paracoccus sp. J56/ Paracoccus sp. MKU1/ Paracoccus sp. SCN 68-21/ Paracoccus sphaerophysae/ Paracoccus thiocyanatus/ Paracoccus versutus/ Pelagibaca abyssi/ Pelagibaca bermudensis/ Pelagibaca bermudensis HTCC2601/ Pelagicola litorisediminis/ Pelagimonas varians/ Phaeobacter gallaeciensis/ Phaeobacter gallaeciensis 2.10/ Phaeobacter gallaeciensis BS107/ Phaeobacter gallaeciensis DSM 17395/ Phaeobacter gallaeciensis DSM 26640/ Phaeobacter inhibens/ Phaeobacter inhibens DSM 17395/ Phaeobacter italicus/ Phaeobacter piscinae/ Phaeobacter porticola/ Phaeobacter sp./ Phaeobacter sp. 11ANDIMAR09/ Phaeobacter sp. CECT 5382/ Phaeobacter sp. CECT 7735/ Phaeobacter sp. P97/ Phaeobacter sp. S26/ Planktomarina temperata RCA23/ Planktotalea frisia/ Pontibaca methylaminivorans/ Ponticoccus marisrubri/ Ponticoccus sp./ Ponticoccus sp. SJ5A-1/ Ponticoccus sp. UMTAT08/ Pontivivens insulae/ Poseidonocella pacifica/ Poseidonocella sedimentorum/ Pseudaestuariivita atlantica/ Pseudooceanicola atlanticus/ Pseudooceanicola batsensis/ Pseudooceanicola flagellatus/ Pseudooceanicola marinus/ Pseudooctadecabacter jejudonensis/ Pseudopelagicola gijangensis/ Pseudorhodobacter antarcticus/ Pseudoruegeria aquimaris/ Pseudoruegeria lutimaris/ Pseudoruegeria sp./ Pseudoruegeria sp. SK021/ Pseudovibrio axinellae/ Pseudovibrio sp. Ad26/ Pseudovibrio sp. FO-BEG1/ Pseudovibrio sp. JE062/ Pseudovibrio sp. W74/ Pseudovibrio sp. WM33/ Puniceibacterium sediminis/ Puniceibacterium sp./ Puniceibacterium sp. IMCC21224/ Rhodobacter aestuarii/ Rhodobacter capsulatus/ Rhodobacter capsulatus SB 1003/ Rhodobacter capsulatus Y262/ Rhodobacter sp. AKP1/ Rhodobacter sp. CACIA14H1/ Rhodobacter sp. SW2/ Rhodobacter sphaeroides/ Rhodobacter sphaeroides 2.4.1/ Rhodobacter sphaeroides ATCC 17025/ Rhodobacter sphaeroides ATCC 17029/ Rhodobacter sphaeroides KD131/ Rhodobacter sphaeroides WS8N/ Rhodobacter vinaykumarii/ Rhodobacteraceae bacterium/ Rhodobacteraceae bacterium (ex Bugula neritina AB1)/ Rhodobacteraceae bacterium EhC02/ Rhodobacteraceae bacterium GWE1_64_9/ Rhodobacteraceae bacterium HIMB11/ Rhodobacteraceae bacterium HL-91/ Rhodobacteraceae bacterium HLUCCA08/ Rhodobacteraceae bacterium HLUCCA12/ Rhodobacteraceae bacterium HLUCCO07/ Rhodobacteraceae bacterium HTCC2083/ Rhodobacteraceae bacterium HTCC2150/ Rhodobacteraceae bacterium KLH11/ Rhodobacteraceae bacterium PD-2/ Rhodobacteraceae bacterium SB2/ Rhodobacteraceae bacterium UDC319/ Rhodobacterales bacterium HTCC2150/ Rhodobacterales bacterium HTCC2654/ Rhodovulum sp./ Rhodovulum sp. ES.010/ Rhodovulum sp. NI22/ Rhodovulum sp. P5/ Rhodovulum sp. PH10/ Rhodovulum sulfidophilum/ Roseibaca calidilacus/ Roseibacterium elongatum DSM 19469/ Roseibium sp./ Roseibium sp. TrichSKD4/ Roseisalinus antarcticus/ Roseivivax atlanticus/ Roseivivax halodurans JCM 10272/ Roseivivax isoporae LMG 25204/ Roseivivax jejudonensis/ Roseivivax lentus/ Roseivivax marinus/ Roseivivax sediminis/ Roseivivax sp. 22II-s10s/ Roseobacter denitrificans/ Roseobacter denitrificans OCh 114/ Roseobacter litoralis/ Roseobacter litoralis Och 149/ Roseobacter sp./ Roseobacter sp. AzwK-3b/ Roseobacter sp. CCS2/ Roseobacter sp. GAI101/ Roseobacter sp. MED193/ Roseobacter sp. MedPE-SW/ Roseobacter sp. MedPE-SWde/ Roseobacter sp. SK209-2-6/ Roseovarius aestuarii/ Roseovarius albus/ Roseovarius atlanticus/ Roseovarius azorensis/ Roseovarius halotolerans/ Roseovarius indicus/ Roseovarius litoreus/ Roseovarius lutimaris/ Roseovarius marisflavi/ Roseovarius mucosus DSM 17069/ Roseovarius nanhaiticus/ Roseovarius nubinhibens/ Roseovarius nubinhibens ISM/ Roseovarius pacificus/ Roseovarius sp./ Roseovarius sp. 217/ Roseovarius sp. A-2/ Roseovarius sp. A46/ Roseovarius sp. BRH_c41/ Roseovarius sp. HI0049/ Roseovarius sp. HN-E21/ Roseovarius sp. HTCC2601/ Roseovarius sp. TE539/ Roseovarius sp. TM1035/ Roseovarius tolerans/ Rubellimicrobium mesophilum DSM 19309/ Rubellimicrobium thermophilum DSM 16684/ Rubrimonas cliftonensis/ Ruegeria atlantica/ Ruegeria denitrificans/ Ruegeria intermedia/ Ruegeria lacuscaerulensis ITI-1157/ Ruegeria litorea/ Ruegeria litorea R37/ Ruegeria marisrubri/ Ruegeria meonggei/ Ruegeria mobilis F1926/ Ruegeria pomeroyi/ Ruegeria pomeroyi DSS-3/ Ruegeria profundi/ Ruegeria sp./ Ruegeria sp. ANG-R/ Ruegeria sp. ANG-S4/ Ruegeria sp. CECT 5091/ Ruegeria sp. PR1b/ Ruegeria sp. R11/ Ruegeria sp. TM1040/ Ruegeria sp. ZGT118/ Sagittula stellata E-37/ Salinihabitans flavidus/ Salipiger mucosus DSM 16094/ Salipiger profundus/ Sedimentitalea nanhaiensis/ Shimia aestuarii/ Shimia haliotis/ Shimia marina/ Shimia sp./ Shimia sp. SK013/ Silicibacter lacuscaerulensis ITI-1157/ Silicibacter pomeroyi/ Silicibacter sp. TM1040/ Silicibacter sp. TrichCH4B/ Silicimonas algicola/ Stappia indica/ Stappia sp./ Stappia sp. 22II-S9-Z10/ Stappia sp. ES.058/ Sulfitobacter brevis/ Sulfitobacter delicatus/ Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565/ Sulfitobacter geojensis/ Sulfitobacter guttiformis/ Sulfitobacter indolifex HEL-45/ Sulfitobacter marinus/ Sulfitobacter mediterraneus/ Sulfitobacter pontiacus 3SOLIMAR09/ Sulfitobacter pseudonitzschiae/ Sulfitobacter sp./ Sulfitobacter sp. AM1-D1/ Sulfitobacter sp. CB2047/ Sulfitobacter sp. EE-36/ Sulfitobacter sp. EhC04/ Sulfitobacter sp. H3/ Sulfitobacter sp. HI0023/ Sulfitobacter sp. NAS-14.1/ Sulfitobacter sp. SK011/ Tateyamaria sp./ Tateyamaria sp. ANG-S1/ Thalassiobium sp. R2A62/ Thalassobacter arenae DSM 19593/ Thalassobacter sp./ Thalassobacter sp. 16PALIMAR09/ Thalassobacter stenotrophicus/ Thalassobium sp. R2A62/ Thalassobius activus/ Thalassobius gelatinovorus/ Thalassobius maritimus/ Thalassobius mediterraneus/ Thalassobius sp. CECT 5114/ Thalassococcus halodurans/ Thiobacimonas profunda/ Thioclava atlantica/ Thioclava dalianensis/ Thioclava indica/ Thioclava pacifica DSM 10166/ Thioclava sp. 13D2W-2/ Thioclava sp. DT23-4/ Thioclava sp. SK-1/ Tritonibacter horizontis/ Tropicibacter multivorans/ Tropicibacter naphthalenivorans/ Tropicibacter phthalicicus/ Tropicimonas isoalkanivorans/ Tropicimonas sediminicola/ Wenxinia marina DSM 24838/ Wenxinia saemankumensis/ Xuhuaishuia manganoxidans/ Yangia sp. CCB-MM3/ Yoonia litorea/ Youngimonas vesicularis/ marine alpha proteobacterium SE45
Gene_LocusFamily
9rhob-KF032932 Haloalkane_dehalogenase-HLD2
9rhob-a0a017hcw5 Carboxymethylbutenolide_lactonase
9rhob-a0a017hgq6 Duf_452
9rhob-a0a017hmr9 Carb_B_Bacteria
9rhob-a0a017hql7 Carb_B_Bacteria
9rhob-a0a037zdm6 Est-OsmC
9rhob-a0a037zik7 Atu1826-like
9rhob-a0a037zqf6 Duf_452
9rhob-a0a058zic3 Carboxymethylbutenolide_lactonase
9rhob-a0a058zma3 Carboxymethylbutenolide_lactonase
9rhob-a0a058zmb7 Duf_452
9rhob-a0a058zqe9 Est-OsmC
9rhob-a0a058zqg3 Atu1826-like
9rhob-a0a058zs53 BD-FAE
9rhob-a0a059iiq1 Carboxymethylbutenolide_lactonase
9rhob-a0a059imd9 Est-OsmC
9rhob-a0a059iqr3 Atu1826-like
9rhob-a0a061sjl8 Est-OsmC
9rhob-a0a061su26 Carboxymethylbutenolide_lactonase
9rhob-a0a073iff6 Atu1826-like
9rhob-a0a073ikv2 Est-OsmC
9rhob-a0a073irr2 Carboxymethylbutenolide_lactonase
9rhob-a0a073j6a1 Atu1826-like
9rhob-a0a073jfr5 Carboxymethylbutenolide_lactonase
9rhob-a0a074j6y2 CarbLipBact_2

Gene_Locus_FrgtFamily
9rhob-a0a0m6ysr6 Abhydrolase_9
9rhob-a0a0p1gye2 Carb_B_Bacteria
9rhob-a0a0p1h0h4 Carb_B_Bacteria
9rhob-a0a0t5p982 BD-FAE
9rhob-a0a159yy44 Carb_B_Bacteria
9rhob-a0a159yy82 Carb_B_Bacteria
9rhob-a0nvb4 HNLyase_Bact
9rhob-a0p0m9 LYsophospholipase_carboxylesterase
9rhob-a3txc8 Proline_iminopeptidase
9rhob-a3vz16 Haloperoxidase
9rhob-a3vz17 Haloperoxidase
9rhob-a6fpd2 Abhydrolase_9
9rhob-a6fpd3 Abhydrolase_9
9rhob-b9qrw0 Epoxide_hydrolase
9rhob-c7dd45 Pectinacetylesterase-Notum
9rhob-c8rzv0 Hydroxynitrile_lyase
9rhob-m9rnw5 abh_upf00227
9rhob-q3qyd7 AlphaBeta_hydrolase
9rhob-s9qsn5 Carb_B_Bacteria
rhosk-b9kwz0 6_AlphaBeta_hydrolase


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer