Reference sequence (1): 9brad-a3wre8 Identities normalised by aligned length. Colored by: consensus/70% and property |
1 9brad-a3wre8 100.0% -------MLSRTIDTPQGRVAF-------LESS--GSGTPVVFIHGNSTCRDVFRYQFET-ALATTQHIIAIDLPGHGQSDDA-LDPRQAYTIPGYAATLIEALRSLNVT-RAALVGWSL 2 nitwn-q3svd2 87.8% -------MLSRTIETSQGRLAF-------LESS--GSGTPVVFIHGNSTCRDVFRHQFET-TLAATQRIIAIDLPGHGQSDDA-LDPQKAYTIPGYAATLIEALRSLNIT-RAALVGWSL 3 olico-b6jdg5 60.8% -------MLSRKVETAQGRVAV-------LEST--GTGMPVLFIHGNSSSGHAFQRQFEA-DFAKIYRIIAVDLLGHGQSDNA-RDPQQVYSVPGHAAVLIDVLRSLKIH-RAALFGWSL 4 9hyph-a0a2r3sty9 38.1% -------MQKQHVETRHGRLEV-------MTSA--GKGAAVLLIHGNSACKEVFHKQFES-DLAHDFRLIAFDLPGHGASANA-AEPQKSYTLHGYAQAAADVLKALDVS-SVAVFGWSL 5 9hyph-a0a256fxx7 42.0% -----MTINYHELETSHGRIAV-------RESE--GEGAPLLMIHGNSSSGAVFAPQLEG-EIGKKWRVISPDLPGHGKSSDA-IDPEHSYSMEGYADAMTEVMQKLGIA-DAVVFGWSL 6 9rhiz-d2j2t6 42.1% -----MTINYHELETSHGRIAV-------RESE--GEGAPLLMIHGNSSSGAIFAPQLEG-EIGKKWRVIAPDLPGHGKSTDA-IDPDRSYSMEGYADAMTEVMQQLGIA-DAVVFGWSL 7 9rhiz-d8x182 41.4% -----MTINYHELETSHGRIAV-------RESE--GEGASLLMIHGNSSSGAIFAPQLEG-EIGKKWRVIAPDLPGHGKSSDA-IDPDRSYSMEGYADAMTEVMQKLGIA-DAVVFGWSL 8 9rhiz-c4wkm9 43.5% MGTDDMTINYREIETSHGRIAI-------RESA--GEGMPLLMIHGNSSAGAIFAPQLEG-EIGRNWRIIAPDLPGHGQAGDA-LDPDRSYSMEGYADAMTEVLEKLGIS-EAVVFGWSL 9 ocha4-a6wx49 43.9% -------MKSHEIETSHGRIAI-------RESR--GNGTPLLMIHGNSSAGAIFAPQLEG-EIGRNWRVIAPDLPGHGQSGDA-LDPDRSYSMEGYADAMTEVLAKLGIS-DTVVFGWSL 10 9rhiz-c8sqp9 42.7% -----MTISQKTLETTHGKIAL-------RETG--GKGTAVMLIHGNSSSSAVFRNQLES-PLGERYHLIAPDLPGHGASGDA-IDPERSYSMEGYADAMTEVLGLLGVD-KAIVFGWSL 11 rhoe4-c0ztk5 40.0% -------------------MAV-------DDSA--TDGFPVVFIHGNSASRSIFRHQVDA-GWAGDYRMITLDLLGHGDSEDA-SEPEAAYTQNGYADAIVDVLAELGVE-RAVVVGWSL 12 rhoer-c3jn30 40.2% -------MTTTKIETRHGVMAV-------DDSA--TDGFPVVFIHGNSASRSIFRHQVDA-DWAGDYRMITLDLLGHGDSEDA-SDPEAAYTQNGYADAIVDVLTELGVE-RAVVVGWSL 13 pholu-PLU2437 39.7% -----MAISQYDIHTSHAVISV-------ADTG--GDGLPVLLIHGNSSCKEVFRHQINC--FGDEYRILAIDLPGHGASSNA-VDPRRTYSISGYALCIIEVLEKLAID-KVAVFGWSL 14 xenbs-d3v3f7 39.9% -----MVATHDDIQTRYANISV-------LDTG--GSGLPVLLIHGNSSCKEIFRHQIEY--LKGDYRVLALDLPGHGKSSDA-SDPREAYSMPGYARTIMEVLDKMDID-KVVVFGWSL 15 parl1-a7hv92 38.2% -------MKTGTVETAHGTLSY-------TESG--GKGPVVLFIHGNSSCKEIFAKQLES-GIGADYRCIAFDLPGHGKSTNA-PEPEKTYSIHGFADASMALLDALGIG-KAVAVGWSL 16 agrvs-b9k312 36.6% -------MSEKTITTSHGQIAI-------YDTP--GGEIPLLMIHANSVCKETFHFQIEA--LAGKYRIIAIDLPGHGQSSDA-IDPLRTYNFNGYADAICEVIEALGVD-RFAILGHSL 17 nithx-q1qq48 34.8% -------MATGSITTDAGRIAY-------RQSA--GTGSAIVLVHGNSASSKAFARQLDG-NLGRTHRVIAFDLPGHGESDDA-ADPAATYTLPGYARVLHDVVAHLDAA-DAVFVGWSL 18 rhop2-q2j0u2 36.1% -------MQTQTIETSIGRIAY-------RQSA--GSGPTIVLIHGNSASSRAFAPQLDS-PLGAKYRILVPDLPGHGESDDA-ADPAGTYNLPGYAAVLRQVVARLDAA-DAIFVGWSL 19 phano-q0upq4 32.1% -------MSSFTFESEHGLTSV-------IDTALHNDKPALLLLHGNSSSSKIFRHITESQEITSRWRVVTFCLPGHGSSSKA-PNPSQTYHMRGYAEVAVRILQHLNIE-EVVVVGWSL 20 penmq-b6qcs8 28.6% -------MPQETISTVYGDLHA-------IVNGNLDSDKTLLLLHGNSSTWKAFTPILDNELLQSTYKILAFDLPGHGDSADA-PDPQLSYNIPAYAKAALEVLRHFQVK-SYVAFGSSM 21 talsn-b8ly90 29.2% -------MPHETINTVFGQLHA-------VVQGNLDSDKTLLLLHGNSSTWKAFTPILDDEVLKSTYKLIAFDLPGHGDSGDA-PNPQLSYNIPAYAKAALEVLRHFQVK-SYVAYGSSM 22 mago7-a4rdm3 27.8% M----PTPQTQTIPTPWCPISATILQPDPTTTPPHPTDLTLLLLHGNSSSSLAFTHILSRPPPPGVSRVVALDYPGHGRSGNATAEHQRVYTQPGYAAVAAHALAALNIRGRVAVLGWSL 23 pedhd-c6y3z2 23.1% -------MTQKFITIANCKLAY-------LEKN-STAQNTIFFIHGNSVSSRSWKAQLSS-ERLQGYRLIAIDLPAHGDSGAS-ADPGADYSIPGLGAIVAAAIKVLAADRPYILVALSL 24 sacd2-q21ez0 23.1% -------MNKYVKEINGIRTEI-------IESR--GVGTPVFIFHGNSSGASAYVDLLQS-EVGDTYRLIAVSFPGHGESAYY-REDVTEVTIEQLGEFTVDVVNSFGFD-KYVLIGQSL consensus/100% ...................hth.........p...s.t.slhhhHuNSss...a...hp.....t..+hls.sh.uHGtut....p....hp..thu.h.hthht.htht..hhhhu.Sh consensus/90% .......h....hph..s.hth.......hpst..stt.slhhlHGNSsstthFt..hps..httt.+hls.DL.GHGtSssA..-PttsYs..uaAtshhpshtththt.phhhhG.SL consensus/80% .......h..tplpT..u.luh.......hpot..sps.sllhlHGNSustthFt..h-s..hstpaRllu.DLPGHGpSssA..-PttsYsh.GYAtshhcllttLslt.chshhGaSL consensus/70% .......hpppplpTstGpluh.......h-os..GsGhsllhIHGNSostphFt.Ql-u..lutpaRlIAhDLPGHGpSscA.hDPppsYoh.GYApshh-VlppLsls.csllhGWSL 1 9brad-a3wre8 100.0% GGHISLEMIGQGF-------------------------------EAVGAMIVGAPPVKPGILGMFRGF-------------------------QPQLDLLLATKRTLNARDISRFARVCV 2 nitwn-q3svd2 87.8% GGHVSLEMIGQGF-------------------------------DAAGAMIIGAPPIKRGILGMVRGF-------------------------QAQLDLLLATKSALNARDISRFARACV 3 olico-b6jdg5 60.8% GGHIAIEMIGQGF-------------------------------DAAGIMIVGTPPIRPGLLGMVRGF-------------------------QTQFDLLLATRGVLRPHEIERFARACV 4 9hyph-a0a2r3sty9 38.1% GGHIGLEMIAQQA-------------------------------PVSRLMITGTPPFSKEPDSVGQAF-------------------------VPSEELKYGGQRDLDDEQAQSYARHVV 5 9hyph-a0a256fxx7 42.0% GGHIGIEMIARYP-------------------------------EMRGLMITGTPPVA--REEVGQGF-------------------------KSGPDMALAGQEVFSERDVDSYARSTC 6 9rhiz-d2j2t6 42.1% GGHIGIEMIARYP-------------------------------EMRGLMITGTPPVA--REEVGQGF-------------------------KSGPDMALAGQEIFSERDVESYARSTC 7 9rhiz-d8x182 41.4% GGHIGIEMIARYP-------------------------------AMRGLMITGTPPVA--REEVGQGF-------------------------KSGPDMALAGQEIFSERDVESYARSTC 8 9rhiz-c4wkm9 43.5% GGHIGIEMISRFP-------------------------------GMRGLMITGTPPVA--REEVGQGF-------------------------KSGPDMALAGQEVFSARDVESYARSTC 9 ocha4-a6wx49 43.9% GGHIGIEMISRFP-------------------------------GMRGLMITGTPPVA--REEVGQGF-------------------------KSGPDMALAGQEVFSDRNVESYARSTC 10 9rhiz-c8sqp9 42.7% GGHIGLEMIDRFP-------------------------------GLLGLMVSGTPPVS--AEEVGNGF-------------------------KSSPHMHLAGQEAFTAADVEAYARSTC 11 rhoe4-c0ztk5 40.0% GGHIALELIAKFP-------------------------------GLTGVVITGTPPAN--PETLGDAF-------------------------NAGDGLSIGGTEVITAQEAELYARMTA 12 rhoer-c3jn30 40.2% GGHIALELIAKFP-------------------------------GLTGIVITGTPPAN--PETLGDAF-------------------------NAGDGLSIGGTEVITAQEAELYARMTA 13 pholu-PLU2437 39.7% GGHIGLELIPRFP-------------------------------GIVGLMICGTPPVSPGAENVSLGF-------------------------KPSRFMAISGKASLTEEEITDYTLALY 14 xenbs-d3v3f7 39.9% GGHIGLEMLALNP-------------------------------KMIGLMICGTPPVAVGKENIARGF-------------------------CQSKQMRLTGKAEFTDEDVRNFACETN 15 parl1-a7hv92 38.2% GGHAALEMMARWP-------------------------------GTVAAWITGTPPAG--GADMGEAF-------------------------LPGEHMALTFKDAFTQEEAALYAAETI 16 agrvs-b9k312 36.6% GGHVALELMRLLPE------------------------------KTAGTMIFGTPPIPPGPEGAALGF-------------------------LPNPEFAYTGKQILSEQEIDMVVALAL 17 nithx-q1qq48 34.8% GGHIVLEAAPELP-------------------------------QAKGFAIFGTPPFG-FPPAVKQAF-------------------------LMHPAMACTFARDLTDKQARGYVAAAF 18 rhop2-q2j0u2 36.1% GGHIVLEAAPDLA-------------------------------QARGFAIFGAPPIS-FPPAMDRAF-------------------------LPTPAMAYTFQPELDEDQARAYVAAAF 19 phano-q0upq4 32.1% GGHIGIEMIELLQDPKTREN--------------------NKRIVMKGLMLIGTPPAL-GVEQVRQGFTM----------------------ATEESELGLAGQRDWTDEQAVQFSKNSA 20 penmq-b6qcs8 28.6% GGQIAWSMIEISK------S--------------------TQEFDIRGVMTSGSVPFG-NLEEAQEGF-------------------------NINSEDSFATAGSYTSEEVEWAVNNAY 21 talsn-b8ly90 29.2% GGQIAWDMIKIAE-----------------------------DFDVRGVMTSGSSPFG-SVEEIQEGF-------------------------KFNSDDNVATTGSYTDEQVEWAVKNAY 22 mago7-a4rdm3 27.8% GGHVAIELIPLLAPSSLADRAASLGTGPLPGTSPAPSPPPTSEIAIAGIMLVGTPPLG-NAAQFKAGFSPGAGECASARESRRGEVGRGGRDALSEISFFALAAEELTDEMVETLTVAGH 23 pedhd-c6y3z2 23.1% GTNIMAESLAFGL-------------------------------HPAGIVLAGSCLIG--EKYTLDSF------------------------VYPDTNVAVVFTEQAPQNEVRLYASQVM 24 sacd2-q21ez0 23.1% GGHALLESLPAHS-------------------------------NAAGLVLVSSPPIA--LSRLGDAF-------------------------LADPTDGLLFKGELSEQECARFGKAFV consensus/100% Gsph.hp.h......................................thhh.uss.h......h..uF...........................t....h.ht..h..t.h..hs.... consensus/90% GGplshEhh...................................thhGhhl.GssPht....th.tuF...........................t.t..hshtt.hstppht.hst.sh consensus/80% GGHlulEhls.h................................thhGhhlhGoPPhs....thtpuF...........................t.ththshpt.hstpphp.asttsh consensus/70% GGHIulEhIsths...............................thtGlMIsGTPPhu..hpphspuF.........................hss.phslsspp.hopc-sctaupssh 1 9brad-a3wre8 100.0% G----EKHAAQLHDTIARTDRRARQILGRGLRAGL--GVDQRWIVENLPTPIAVVNGSEEPFARLDYVAGISYESLWDQRCHIIDGVGHAPFLEAPERF-NPLLFRFLNDIDFSRTDNT- 2 nitwn-q3svd2 87.8% G----EKHAAQLHDTIARTDRRARQILGRGLRSGL--GVDQRWVVENLPTPIAVVNGSGEPFARLDYVAGISYAALWDHRCHIIDGVGHAPFLEAPERF-NPLLLRFLGDIHCSRIDGT- 3 olico-b6jdg5 60.8% G----ETYAAQFHDAIARTHVRARPLLARGMMTGV--GLDQRQIIENLPAPVAVVNGAYEPFARLEYLSSLTYRNLWGGHCHIIDGAGHAPFLTAPEQF-NSLLSLFLEDASRYHADDA- 4 9hyph-a0a2r3sty9 38.1% HPD--KPTPDFVVDAVRRTDGLTRQTMFENILADN--IADQQHMAENCPVPLAILNGAEDHFINNAHIASLNYKNLWEETIFLLPQVGHAAFLEKPQVF-NRILSRFLRG---------- 5 9hyph-a0a256fxx7 42.0% G----EPFEASLLDIVARTDGRARRIMFEKFGNGT--GGNQRDIVAQAKLPIAVVNGRDEPFVELDFVSKVKFGNLWEGKTHVIDNAGHAPFRETPAIF-DRYLMRFLSDCTIG------ 6 9rhiz-d2j2t6 42.1% G----EPFEASLLDIVARTDGRARRIMFEKFGSGT--GGNQRDIVAEAQLPIAVVNGRDEPFVELDFVSKVKFGNLWEGKTHVIDNAGHAPFREAPAEF-DAYLARFIRDCTQ------- 7 9rhiz-d8x182 41.4% G----EPFETSLLDIVARTDGRARRIMFEKFGNGT--GGNQRDIVAEAKLPIAVVNGRDEPFVELDFVSKVKFGNLWDGKTHVIDNSGHAPFREAPAEF-DAYLARFIGDCTK------- 8 9rhiz-c4wkm9 43.5% G----EPFEEGLLDIVARTDGRARRIMFEKFAAGT--GGNQRDIVAAATLPIAVVNGRDEPFVELDFVSKVRFGNLWEGKTHIIDGAGHAPFRETPAVF-DAYLERFMRDCTA------- 9 ocha4-a6wx49 43.9% G----EPFEDQLLEIVARTDGRARRIMFEKFAAGT--GGNQRDIVAEARLPIAVVNGRDEPFVELDFVSKVRFGNLWEGKTHVIDGAGHAPFRETPAVF-DDYLQRFMRDCTA------- 10 9rhiz-c8sqp9 42.7% G----EPFEPFLLDTVARTDGRARRLMFEKFAAGT--GRNQREIVAGKTPPIAVLNGMDEPFVNTDFVAAVKFSNLWEGKAHLLDRSGHAPFWDSPDRF-DPIFARFLASVDQA------ 11 rhoe4-c0ztk5 40.0% -----VPFEQSALDAAIRTDGRARKIMFDAFGAGR--ESDQKSLVATASVPLAVIDGAEDPFVNTSYVASLTFANLWEGTYHVIPGVGHAAFWEAPEIY-NPLLQRFLGSFANN------ 12 rhoer-c3jn30 40.2% -----VPFEQAALDAAIRTDGRARKIMFDAFGAGR--ESDQKALVATASVPLAVIDGAEDPFVNTSYVASLTFANLWEGTYHVIPGVGHAAFWEAPEVY-NPLLQRFLGSFAQ------- 13 pholu-PLU2437 39.7% GEN--ALCEPFLRAAVARTDGLARQYMSEASVSPD--VMDQRLLVETNPTPLAIVNGVEDLFVNIDYINGITYKNLWTGQVYNLLNLGHGPFWEAPELF-NRLMAGFFSDLTLEV----- 14 xenbs-d3v3f7 39.9% GVN--APHEPFMIEAVARTDGLARQYMFEAFISPQ--ATDQKLLAETSEVPLAIVNGVGDPFINHDYINGLNYRNLWQGQVFNLSGVDHAPFWEAPDIF-NPILAEFLKDL--------- 15 parl1-a7hv92 38.2% GGD--AAPEPWMIDGCSRADGRFRPLMLQSVAAGL--DLDGREIAETSPLPLAVVSGEHEPFVNNAFLGSINYRNLWDGKVHILKGQGHMPFWQAPEET-NALLKRFLADVT-------- 16 agrvs-b9k312 36.6% GSD--AVHDTFWKSAVRRTDGRSRELMIDAALAGR--HSDQRALVETSAVPLAIVNGADDPVINLDYIDNLTYGNLWNRGAVRVENAGHGLHWQRHKEF-NVLLDNFLTSVA-------- 17 nithx-q1qq48 34.8% RPG-VADLPAFMIDDVLRTDGHARKNLGASITPGG--FRDEVAVIASLTRPLAVLHGAEEQLINGDYVKTLAMPTLWRGAVQTVPGAGHILQWEQAESF-NALLDAFAADCG-------- 18 rhop2-q2j0u2 36.1% RPG-VGELPAEMVADVLRTDGRARGQLAASIRPGG--YRDEVAVAADLKQPLAVLHGAEEQLVNGAYFDTLTMPTLWRGRVQVIDDAGHLPQWEQAKRF-NALLDAFVTEANA------- 19 phano-q0upq4 32.1% AAGKEEFWARWMEQDAKDTDPRVRMIMADRFLGKEPGGVDQRKVVESTDVLIAVVNGAEEQFVNLDYLDKIKWKNLWKNECLRLDGLHHAPFWEDPARF-EKILVEFVADVEKIQ----- 20 penmq-b6qcs8 28.6% G----GTPRLFMYEALRRTDQGARPLMFEHIVKGG--STDQRKVVKETQVPLAVVNGEKDVLIKLDVFDRLEFGNLWKGKAITVKGSGHCPYWDNPKEF-LPMLTEFADECYAA------ 21 talsn-b8ly90 29.2% G----GVPQPFI----------ARPLMFENIVKGE--STDQRKIVKETKVPIAIVNGETDPFINLDVFDRLEFGNLWKGKQITILGSGHCPYWDNPDEF-LPILVEFAANCYAA------ 22 mago7-a4rdm3 27.8% G----PPREQWMADGARRTDGRARRVMAENAFAGE--LSDQVGIVGASDVLCAVVNGAEEPFVNLDYVDGIRFRNLWKGECHRIPGLGHAPFWEAPDLFWDGYLTPFLADCDAAQAYSL- 23 pedhd-c6y3z2 23.1% SNS-DASVVEEFVTDYYQVKLPFRSSLSGSIQEQK--YNDQIALIHAVDKPALVIFGKDEQVINPDYLDDAPFK-LWQNTVFKIPGASHLVQSDRPEEF-NKLLADYAAETFI------- 24 sacd2-q21ez0 23.1% QTG-SIDKLQELVTLIESTHPQFREQLGAGLGAGK--VLDEVALLKQSDLPCLMLKGEFDRFLNSAYYDTLLNDDKIKADVITFPGAGHAIQVDLPTAF-EVVVGQFIANVTSANVSKPA consensus/100% ...........h...........R..h.tt.........st..hhtt....hhhl.G..-.hhp.thhtth....hhttt...h.t.tHh...p..t.h...hh..ahtt.......... consensus/90% t..........hht.h.psc..hR..hhtthhts.....sph.lhtt..hPhAllpG.t-.hhp.sahstlthtsLWptphhhl.s.uHh..hptst.a.p.hl.tFhtph......... consensus/80% t....t.h...hhp.hhRTDhhsR.hhhpthhsst....sQhtlltp..hPlAllsGtp-.hlphsalstlpatsLWpspshhl.ssGHssah-tPt.F.s.hL.tFhtsh......... consensus/70% u....tshtt.hh-sltRTDs+ARplMhcthhsGp..tsDQ+tlltssphPlAVlNGt--sFlphDalsplpatNLWcGpsahlsssGHuPFh-sPp.F.sslLtcFls-ss........ 1 9brad-a3wre8 100.0% -----TQQRIRSVA 2 nitwn-q3svd2 87.8% -----TQPQIRSVA 3 olico-b6jdg5 60.8% -----ERHRV--VA 4 9hyph-a0a2r3sty9 38.1% -------------- 5 9hyph-a0a256fxx7 42.0% -------------- 6 9rhiz-d2j2t6 42.1% -------------- 7 9rhiz-d8x182 41.4% -------------- 8 9rhiz-c4wkm9 43.5% -------------- 9 ocha4-a6wx49 43.9% -------------- 10 9rhiz-c8sqp9 42.7% -------------- 11 rhoe4-c0ztk5 40.0% -------------- 12 rhoer-c3jn30 40.2% -------------- 13 pholu-PLU2437 39.7% -------------- 14 xenbs-d3v3f7 39.9% -------------- 15 parl1-a7hv92 38.2% -------------- 16 agrvs-b9k312 36.6% -------------- 17 nithx-q1qq48 34.8% -------------- 18 rhop2-q2j0u2 36.1% -------------- 19 phano-q0upq4 32.1% -------------- 20 penmq-b6qcs8 28.6% -------------- 21 talsn-b8ly90 29.2% -------------- 22 mago7-a4rdm3 27.8% -------------- 23 pedhd-c6y3z2 23.1% -------------- 24 sacd2-q21ez0 23.1% VASSQESQEVHVNG consensus/100% .............. consensus/90% .............. consensus/80% .............. consensus/70% .............. |
MView 1.56, Copyright © 1997-2013 Nigel P. Brown
#protein: highlight amino acid physicochemical properties
hydrophobic => bright-green { A, G, I, L, M, P, V }
large hydrophobic => dark-green { F, H, W, Y }
cystein => yellow { C }
negative charge => bright-blue { D, E }
positive charge => bright-red { K, R }
polar => purple { N, Q }
small alcohol => dull-blue { S , T }
any => dark-gray { X }
#protein consensus: report conserved physicochemical classes, derived from the Venn diagrams of Taylor W. R. (1986).
# The classification of amino acid conservation.
#J. Theor. Biol. 119:205-218.
alcohol => o { S, T }
aliphatic => l { I, L, V }
aromatic => a { F, H, W, Y }
charged => c { D, E, H, K, R }
hydrophobic => h { A, C, F, G, H, I, K, L, M, R, T, V, W, Y }
negative => - { D, E }
polar => p { C, D, E, H, K, N, Q, R, S, T }
positive => + { H, K, R }
small => s { A, C, D, G, N, P, S, T, V }
tiny => u { A, G, S }
turnlike => t { A, C, D, E, G, H, K, N, Q, R, S, T }