Reference sequence (1): aviad-O55278
Identities normalised by aligned length.
Colored by: consensus/70% and property
1 aviad-O55278   100.0%  ------------------------------MANFTSVR---------------------------HEGHINYF----------------------------------------------- 
2 aviad-Q9Q9I2    11.4%  ------------------------------------------------------------------------------------------------------------------------ 
3 aviad-RTL6      12.3%  MGG-----YRSKFCVLFQLFGVLL-----GASAFSGTK---------------------------SEGCHDLV-------NRSCVAMPPA-----------------TKLEAPKSAGNPN 
4 mardi-ORF1      10.4%  --------------------------------MWTDINP---------------------PSRKPLHGDS---LDIKTNEEHITLSSPRTS---TKTTNENGHEKDSKDIKFSFST---N 
5 melhe-LORF1     10.5%  MPAKGEVEHHAGYGVALAILALLLIHATALIMIFSDVNLRTGQHGDDVHLRYPLTFDGATPPRAGDHGHSELWTDIKNNTDSTYSSQPPTMLFPKPTTVSHYPEHNSTTIIIPAS----- 
6 aviad-Q64767     7.4%  ------------------------------MRGFV----------------------------------------------------PP-----------------------TSS----- 
7 aviad-Q64777    22.1%  ------------------------------MSALSSC----------------------------FNGSDSRW-------------DPPY------------PKADVRRLMGTYS----- 
  consensus/100%         ........................................................................................................................ 
  consensus/90%          ........................................................................................................................ 
  consensus/80%          .................................hs..................................................................................... 
  consensus/70%          ..............................h.haosh.............................pGp..................P........................s.S..... 

1 aviad-O55278   100.0%  ---------------------------WYGQHGMAPSKIHGP---------------------------------LHDDDMIYWRLRDRGFLRGGREKNLILLVHGWH------------ 
2 aviad-Q9Q9I2    11.4%  ------------------------------------------------------------------------------------------------------------------------ 
3 aviad-RTL6      12.3%  RLP--------------------SRITWYGSHGGVPK--------------------------------------FHDARYEYGVYHKMHNAFAGK-SDIVLLIPGWY------------ 
4 mardi-ORF1      10.4%  RHPISVSPTTDIVSIAVSHNNPMGGDTWQVSRNG-PNTVHVPIYGKPILRLNGEELSTQIAHMSMWDELAGSFKTFAATAESFHMITTTHLFNKTLHKDVFFVVHGWH------------ 
5 melhe-LORF1     10.5%  ----EMPAMQDIVSIVVSKRHSGSRDAWHVSEYG-PNIIRMPHTHKDIPKPFNSILSNQFALLTMWDNLVGMFKTFWGNAMGFHQMIREGLVDLRLHTDVIFLVHGWH------------ 
6 aviad-Q64767     7.4%  -----------------------------------PD----------------------------------------------------------------------------------- 
7 aviad-Q64777    22.1%  -----------------------------------PDFPSWP------------------KLIVWWNE---TFLTFSDGPWVVSQMRRLGVLDGKDSGELIILVQDMYPDVCPLINRARY 
  consensus/100%         ........................................................................................................................ 
  consensus/90%          ........................................................................................................................ 
  consensus/80%          ...................................Pp................................................................................... 
  consensus/70%          ...................................Ps......................................h.ss...h..hhp.t.h.ht..tplhhll.sha............ 

1 aviad-O55278   100.0%  --GLHRTFDIFFSFLRFHQKMTPDVGVLLVDWGVQGADKLILGDAAYHAVTI---------NIDGLLKNL-NRTNLHCIGHSLGAHACGAICRRFN-QLQK-KKCTRIVGLDPAGPLFK- 
2 aviad-Q9Q9I2    11.4%  -----MGYQSFRQVLRVHQNMTPAVALLLVDWNLYYDYD---------GLYV---------DFGKFLSDIPHSKRLHCIGHSAGAHACSTICRQWT-YISGDRRCTRIVGLEP------- 
3 aviad-RTL6      12.3%  -----LGYDDFRKVLRFHQKMTPAVGVVLVDYRLYYDTD---------GLHA---------DFRKFLVDIPDAKKLHCIGHSAGAHACSTICRQYS-QMSKGHRCIRIVGLEP------- 
4 mardi-ORF1      10.4%  --GITNDTHIFLSAVRLLTRMMPTSCIIYLSWESQGAIG-TAADAILLARRV---------NITQFLSAMPSQLRIHCMGHSLGSYVCGSICRQYH-SLMS-GICKGILGINPYE----- 
5 melhe-LORF1     10.5%  --GRTNDTEFFLSANRLLTRMIPSAAVVYVSWDPQGAME-PAADAILLARRI---------NVTQFLYAVPSNMGIQCIGHSLGSYVCGSICRQYY-YTGK-GRCKRILGINAYE----- 
6 aviad-Q64767     7.4%  ---------------------------------------------------------------------------------------------------RGSKKVGRIVALDPPLESFQG 
7 aviad-Q64777    22.1%  DGTYKWTSEMMRKILRMHTIMTPESPVILLDWTNQLRDICKKVDALLWGQDVRGPAYYAVRTTAHFFTEF-KDHRIHCIGMSLGGTVCAALSRQLLVRTEGQKRFARIVALDPPLESFQG 
  consensus/100%         ....................................................................................................t.thhhtIlulps....... 
  consensus/90%          ....................................................................................................t.thhhtIlulps....... 
  consensus/80%          ......s.p.hhph.Rhhp.MhPtssllhlsat..ht...........u..h.........shtthh.th.pthtlpChGhShGuhsCuslsRph...htt.t+stRIlulpP....... 
  consensus/70%          ......shc.FhphlRhhppMhPsssllhlsWp..hs.t.........uhpl.........shspFL.sh.pphplHCIGHShGuasCusICRQa...hpt.++CtRIVGL-P....... 

1 aviad-O55278   100.0%  ------------TNSPYPYLTKAR-----LSKEDADYVALFMTNRRMMGLHELEGDEYITPYIDGTYLNHCPFVGKWTGTITAENYQGRKVTEYIDLGTV-AKSG-------------II 
2 aviad-Q9Q9I2    11.4%  ------------TFVTGG-----------LDKNDADYVAVLKTEGSWITGGYTASEDIMLEDKGG---RGCGIHGGWSGRVCAESVWGQTVCEEFSWRDTWSKSG--------CFHRLIV 
3 aviad-RTL6      12.3%  ------------TFVSGG-----------LDKLDADYVVVLKTQYSWITGGYTASEDLMVEDKGG---RSCGIHGGWSGRVCGENVWGATVCEEFSWGNTFSLSG--------CYHRMIV 
4 mardi-ORF1      10.4%  ------------VLFSAPDLYARMHVD--TIRLDAEYVAIFATTSQYLSTSDSDADEYIIVNDAVFMNSVCANPYEWNIHLCTTGYGELKSCERFGAANVTTSPGVVEDGSQICLRMLPI 
5 melhe-LORF1     10.5%  ------------ILSTDSSLISRIQSD--TIRSDAEYVSIFSMGERYIRTVYKDADEYIVAKGISRGVSTCVNPFAWKFSLCTRGVKGREYCENFGANNVTFTSGLREDGSEICERLIPV 
6 aviad-Q64767     7.4%  YRMDLHTKGLNLLLSSGGHWSANRDADSVISRDDADYVVVIASSIGSYGFDRPIGDEYIRSDLTGQKHEACESRAWWKGQICAWSYSGRRHCEDVHIPFDFLRSD------GLCYHIMAP 
7 aviad-Q64777    22.1%  YRMDLHTKGLNLLLSSGGHWSANRDADSVISRDDADYVVVIASSIGSYGFDRPIGDEYIRSDLTGQKHEACESRAWWKGQICAWSYSG-------------------------------- 
  consensus/100%         ............h..s.s...........h.+.DA-YVslh..t.t.hth....u--hhh....s...p.C...h.Wphplss.sh.t................................ 
  consensus/90%          ............h..s.s...........h.+.DA-YVslh..t.t.hth....u--hhh....s...p.C...h.Wphplss.sh.t................................ 
  consensus/80%          ............hhsoss...........h.+.DA-YVslhtop.t.hshs...u--hhh.phsu...psC...hhWphplCs.sh.G.p.sE.hth..s...ss............... 
  consensus/70%          ............hhsouu.h.tth.....ls+pDADYVslhtoshphhshshstuDEYIhschsG.h.psCs.hutWpGplCupuhtGtphCEphshsssh.pSG........C.+hh.l 

1 aviad-O55278   100.0%  PHTMECMLTPHGPCSFH------------------------------------------------------------------------------------------------------- 
2 aviad-Q9Q9I2    11.4%  PKFLKTLDVRTGLPMFHLL--NEGFKVGPVRSTWNGYTMSRDYRYASYFNHISISYMTEITYSPVL--KQDFVTPIMIIVVASSGSRMFIGGYSEQTLRYGRY---DVLTAVGY------ 
3 aviad-RTL6      12.3%  PKFLKTLDVKTGLPVFHVL--QEGSRVGPVRSTWNGYTLSRDYRYDSYFNHYSIKYMTEMSYSPNF--KKDFVSSIMIIVVASHDSSVYMGGYSVQTLRYGKY---DVTTEIAY------ 
4 mardi-ORF1      10.4%  IAVLQSLDLKSSYPLLRIAPPDASNEVTHLPSIWNIYVVGKDYRYSTYAKNDSLWYSSAICAGDT-----GFSIPSVFTVFAPPSISLRVRAAVQQ--SSTIY--KNITIYSAF------ 
5 melhe-LORF1     10.5%  MAVLQTLDVSSTYALLQLDPKRPSGMTAHISSVWNVYVLEKDYRYATYAKNEPVWYSTVLSVGPN-----GFTPAAVFAVLSRSDTPVIIRDAIQQ--RYSLW--GNISMHSAF------ 
6 aviad-Q64767     7.4%  LTFMKALDTHQADQLLSMH--------GSVPSAWSAYVTGRDYSQPTQY------YTEEVADWRMLLREDDMASSYLLLVVTE--------GNAAELWTYDPYYTKTIGMEHGYSVRWYF 
7 aviad-Q64777    22.1%  ------------------------------------------------------------------------------------------------------------------------ 
  consensus/100%         ........................................................................................................................ 
  consensus/90%          ........................................................................................................................ 
  consensus/80%          .thhpsh.h.ps...hp....................................................................................................... 
  consensus/70%          .thhpsLDsppu.shhph.........s.l.ShWshYsht+DYp.so.h......Y.p.hs.........shs.s.hhhVhs.........s...p..p.s.a...sl.h..ua...... 

1 aviad-O55278   100.0%  --------------------------------------------------------------------GVPRH----------------------------PPRPTCIP----------- 
2 aviad-Q9Q9I2    11.4%  ---TELAEEVLWIRHWNPSASIYLVYVITPQGFYQDSSSAPSIKDRKVMTGGCVRTMHCNPTRDPF--GRPAHYCMVTKERFPLMSYRTMLNPNGGSQVSVPPQSGCLADRDASIAMIPI 
3 aviad-RTL6      12.3%  ---TELAEGSLWIHHLNPNARIYLVHVITPQGFYQVSDSVAPLANRQIMTGGSVRTMYCTRTPDPL--GRPSHYCMYTKEHFPIMQYRTMLNPNGGAHINVPPTAGCLVDKNTTAGMIVS 
4 mardi-ORF1      10.4%  LKNTSRYYPTVTLETLGPILSAY---------AWRGRMHNSSYYPLP-LPEQEIMEYKCTH-ID------RTYTCIPTDLIYATTVWRQIFSM--GHIFPVYPSNNCLPYRPTNA--IIW 
5 melhe-LORF1     10.5%  IEDSPTHFPSIGIRIQSPILGAF---------AWKGRVYSGPRIQIP-VPEQAVVDYNCLP-KD------ADHLCVSTKNVSSITIWRKLLLA--NYSFSILSIDDCLPYIPHMA--VIW 
6 aviad-Q64767     7.4%  IRDRNVGEAPIVLYARGGGVLKFI-------RLYKGRGTLTSLGARA-MTTQEVTEFTCFRTHTYYFTGTKKYDCHPGGHRFDVPRWRSHINVS-AHHLPVPPKCGCLKFPKLFKDYVIF 
7 aviad-Q64777    22.1%  ------------------------------------------------------------------------------------------------------------------------ 
  consensus/100%         ........................................................................................................................ 
  consensus/90%          ........................................................................................................................ 
  consensus/80%          .......................................................................ta.............................s.ssCl............ 
  consensus/70%          ...p.hh..slhl.h.ss.h.ha.........hapsp...sshh.h..hstttlhph.C....s.......pa.Ch.st.h.sh..aRphh....s..hsl.PpssCLs...h.h..l.. 

1 aviad-O55278   100.0%  ---------------------------------------------VC------------------------------------------------------------------------- 
2 aviad-Q9Q9I2    11.4%  QLADVEVKVGHGLKVDLSKSPFWLTSIQLTDSSGTHK--LYSFWDVCQTA---AQCVFQLD------RMKKEFTVTFFNADVFELEFFLEFEVIKLKVTVSP-----LEPVSVEFPPEPT 
3 aviad-RTL6      12.3%  KLPDMNVTVGHKLQIDLSRSPFWLMSVHLTDRVGTHR--LVSYWDTCVTS---SQCVFHLN------RMKKEFNVTFFAEDVYDLEFFLQFEVIKLKVTVSSPVNRVVEKVTTAEPIANY 
4 mardi-ORF1      10.4%  RRPVLEIGVWNNITASFQRNKQ-LMALTFENHNTATNTTLLTFHDVCRESKIRSVVYFEYD------WLETSMNITVLIPGLYTLRWFFPFEIIEMPVRVSY------------------ 
5 melhe-LORF1     10.5%  KHPAIEVATWRNITVTFHPSVQ-LMAMRFENVLTPRNYTLMTFHDVCRADEINSGIFFEYD------WLGANMTIAVSKAGSYVLRWFFEMGIYEIPIAVYE------------------ 
6 aviad-Q64767     7.4%  DHPNVVGRAGEYVSLGPWSTGL-QAVVTFKPQPRRHRVVLATYWDACSNTKRRVGIDVRTDRKNHMVWLKADKPVS------REMWFVSEVDVVRVYVT--------------------- 
7 aviad-Q64777    22.1%  ------------------------------------------------------------------------------------------------------------------------ 
  consensus/100%         ........................................................................................................................ 
  consensus/90%          ........................................................................................................................ 
  consensus/80%          .............................................sC......................................................................... 
  consensus/70%          phssh.htshp.lphs...s....hshphps..t.pp..LhoaaDsC.ts...s.h.hphs......hhttphsls......h.h.ah..htlhch.lt..................... 

1 aviad-O55278   100.0%  ------------------------------------------------------------------------------------------------------------------------ 
2 aviad-Q9Q9I2    11.4%  ASLNSTSTDSASTVSTWNFSAATPSSSDFWSTSETASEEEVVTVQLNETEPVQAV-ALRA-IDEGSRVAASGASTGTLFLTVVGLVFLAMVAVLVSTAIRRKKVAMGLRDPSLRLLSSEE 
3 aviad-RTL6      12.3%  TSVNAT--------SVWESSDPTPTSEYGW--NETATNADAIMITLNASEPFPRMEALQAPVQIPSEEGSTGVSTEALFLIVVGLAFVAMMVTLLRTRSRKPK-------GTPPLLISEE 
4 mardi-ORF1      10.4%  --------------------------------NNSFAQ------------------ALTT------------------------------------------------------------ 
5 melhe-LORF1     10.5%  --------------------------------NE-------------------------------------------------------------------------------------- 
6 aviad-Q64767     7.4%  -----------------------------WLSPE-------------------------------------------------------------------------------------- 
7 aviad-Q64777    22.1%  ------------------------------------------------------------------------------------------------------------------------ 
  consensus/100%         ........................................................................................................................ 
  consensus/90%          ........................................................................................................................ 
  consensus/80%          ........................................................................................................................ 
  consensus/70%          ................................sp...................................................................................... 

1 aviad-O55278   100.0%  ---- 
2 aviad-Q9Q9I2    11.4%  SSTL 
3 aviad-RTL6      12.3%  SFTL 
4 mardi-ORF1      10.4%  -SRV 
5 melhe-LORF1     10.5%  --RE 
6 aviad-Q64767     7.4%  ---- 
7 aviad-Q64777    22.1%  ---- 
  consensus/100%         .... 
  consensus/90%          .... 
  consensus/80%          .... 
  consensus/70%          .... 

MView 1.56, Copyright © 1997-2013 Nigel P. Brown

#protein: highlight amino acid physicochemical properties
hydrophobic          =>  bright-green      { A, G, I, L, M, P, V }
large hydrophobic    =>  dark-green        { F, H, W, Y }
cystein              =>  yellow            { C }
negative charge      =>  bright-blue       { D, E }
positive charge      =>  bright-red        { K, R }
polar                =>  purple            { N, Q }
small alcohol        =>  dull-blue         { S , T }
any       => dark-gray                     { X }
#protein consensus: report conserved physicochemical classes, derived from the Venn diagrams of Taylor W. R. (1986).
# The classification of amino acid conservation.
#J. Theor. Biol. 119:205-218.
alcohol          =>  o       { S, T }
aliphatic        =>  l       { I, L, V }
aromatic         =>  a       { F, H, W, Y }
charged          =>  c       { D, E, H, K, R }
hydrophobic      =>  h       { A, C, F, G, H, I, K, L, M, R, T, V, W, Y }
negative         =>  -       { D, E }
polar            =>  p       { C, D, E, H, K, N, Q, R, S, T }
positive         =>  +       { H, K, R }
small            =>  s       { A, C, D, G, N, P, S, T, V }
tiny             =>  u       { A, G, S }
turnlike         =>  t       { A, C, D, E, G, H, K, N, Q, R, S, T }