Reference sequence (1): 9baci-q2bd09 Identities normalised by aligned length. Colored by: consensus/70% and property |
1 9baci-q2bd09 100.0% ------------------------MDYEIYNLGDVTLQSGVTLPNAFLAYKTYGELNEKKDNVIVYPTAFGDQHVQ-NEWLIGEGMALDPRKYFIIVPNLLGNGLSSSPSNTPA---PFD 2 mycs2-i7gg46 49.2% MRQGLSRRHLQATTQRWRAMDEFPQDYELFDLGDVTLQHGATLRDAKLAYKTYGELNADKSNAIVYPTWYSGRHWD-NEWLIGEGKALDPAKYFIIVPNMLGNGLSTSPSNTPP---PYN 3 braja-BLL7862 46.0% MHRHFSGAFCDRVSGVERMTAQ--RDYETFEAGDVTLQSGAIFPSMTLAYKTYGTLSPAKDNVILYPTSFSAQHYD-TEWLIGSGGVLDPERYFIIIPNLFGNGLSSSPSNTA------- 4 brasb-a5et73 47.5% M------------------TSV--ADYQIFEAGDVVLQSGATVPSLRLAYKTYGTLNAAKDNVILYPTSFSAQHVD-TEWLVGPADILDSDRYFIIIPNLFGNGLSSSPSNTPP-----A 5 glovi-GLL2500 42.2% MT----------------------RSAEAFALENFALQCGTVLTRAQLVYQTHGELARGRDNAVLYPTSYGARHAD-IDWLIHPDRILDPRRYFVIVVNMFGNGLSTSPSNCEK---CAL 6 synp6-q5mzf3 41.4% ------------------------MTVGTFRLPNFELDCGAVLPEASLVYATYGELNRDRSNAILYPTSYGAQHST-IDWLIGGDRILDPDRWFIVIVNQFGNGLSSSPSNDPA---CGL 7 synjb-q2jhu6 42.3% ------------------------MTHYTWSLNDFQLQCGIQLPQITLAYATYGTLSPRKDNLILYPTSYGAQHPD-LEWLIRPDGILNPQRWFILIPNMLGNGLSTSPSNDPA---CGL 8 aspcl-a1cns2 42.2% MAG---------------------KEYEIFKLGDWELQSGEKLPDAHLAYTTFGD---PSSPAIVYPTWYTGLISD-NLWLIGDDKVLSPKKYFIIIPALFGNGQSTSPSNQK------H 9 strcl-CVM4 38.4% ------------------------MECRIFEIDELPLLDGEVLRDARIGYAMYGTPNADGTNVVLCPSFFGRDHTG-YDWLIGAGLPLDTRRYCVVTAGLFGNGVSSSPGNHP------S 10 solus-q43s18 35.3% MKALVLLILCRAAIAQSPVT----PERHEFIISDFHTESGATLPQARIVYGTYGHLNADHSNAVLLPSHYMANLRG-YEWLIGSGKALDPAQLFLITSELFGNGSSSSPSNTPE---PFH 11 9noca-q6rej1 33.5% M------------IENPYYTNEFHGDYELIGIGQLDLEEGGSIPDCQLAVATFGVLNEAKDNAILIPTWYSGTHQIWRDVYIGPDHALNPEKYFIVCIDQIGSGLSVSPHNAAGANAGIA 12 corgl-CGL0839 34.8% M------------LDNSFYTAEVQGPYETASIGRLELEEGGVIEDCWLAYATAGTLNEDKSNAILIPTWYSGTHQTWFQQYIGTDHALDPSKYFIISINQIGNGLSVSPANTAD--DSIS 13 9psed-q0mrg5 34.8% M--------------NSYYTEENHGPFELINIGPLPLEEGRCMPECLLAVAVHGALNADKSNAILVPTWYSGTSKAMEQIYIGEGRALDPSKYCIIVVNQIGNGLSSSASNTGG---SLA 14 9burk-q4av60 33.5% M-----------------------EQQARHLIDTFALQCGTTVRALRLEYAMHGQLNHERTNAILFPTWFGATHKA-NSWIIGPGRALDTEKYCVIVVNALGNGRSSSPSNHPD---LLH consensus/100% .............................h.h..h.h.pG..h.th.l.hthhG.....tsshllhPo.a.t........hlt.s..Lsstphhll..t.hGsG.SsSstNt........ consensus/90% ..........................hthh.hsph.LppG..h.ph.lshthaGt.s.tpsNsllhPo.assph.t..phhIt.shhLsst+ahllh.s.hGNG.SsSPuNp........ consensus/80% .........................phthhtlsph.LppGthl.ph.LsYtsaGpLs.t+sNsllhPT.auupp.s..phhIG.sthLssp+ahllhss.hGNGhSoSPuNps....... consensus/70% M.......................hshchaplsshtLpsGsslspspLuYtTaGpLNts+sNsILhPT.auupH.s..-WLIGsscsLDPp+YFIIlsNhhGNGLSoSPSNss.....ht 1 9baci-q2bd09 100.0% RSSFPQVTIYDNVTLQHRLVTEKFGIQKIALVLGWSMGGLQSYQWGASYPDMVERIAPFCGSAKTWPHTFMVLDGMKASLMAA---VGFDSSKL-------------NELTSAEMRAAGH 2 mycs2-i7gg46 49.2% AARFPHVTFYDQVEVQHQLVT-SFGIETLALVTGWSMGAGQTYQWAVSYPDMVQRALPFCGSSKTSEHNIVFLEGVKSALTAD---AAFKEGWY-------------TEKPTKGIRAAAR 3 braja-BLL7862 46.0% -GPFPEPTYHDAIAVQHRLLTGRFGISKLALVYGWSMGGMQAYHWAASHPDMVERAAVVCGSARCAPYNHVFLESVKAALTGD---PAFRNGRF-------------VEKPTVGYRAMGR 4 brasb-a5et73 47.5% DAPFPAISYHDAVAIQRRLVEEQFGITRIALVYGWSMGGMQAYHWAACHPDMVERAAVVCGSARCSPYNHVFLDAVKAALIAD---PAYKNGRF-------------VAKPVAGLRAMGR 5 glovi-GLL2500 42.2% AEQRFWFTHFDNVRAQERLLIEVFGIERLAMVYGWSMGAQQAYHWGALYPERVERIAALCGTARTTDHNRVFLESLRAALTAD---PAWTGSGF-------------DGIPERGYRAFAR 6 synp6-q5mzf3 41.4% AEQGFWFSHWDSVCAQQALLSQVLGIEQLALIHGWSMGAQQAYHWAIAFPDRVQRIAALCGTAKTTEHNRLFLESLRAALIAD---PTWDGQRF-------------QATPDRGYKAFAR 7 synjb-q2jhu6 42.3% REDGFWFSHWDNVRLQESLIRQHFGIERIRLIYGWSMGAQQAYHWGSLFPERVERIVALCGTAKTTVHNRVFLESLRSALTAD---PAWNGRRF-------------TGVPERGLRAFAH 8 aspcl-a1cns2 42.2% SGPFPTCSFYDNVRAQYKLVTEHFGIKHLRAVIGWSMGGAQTFQWATQFPDFMDLAVPFCGAARTSVHNQVFLEGVKSALLAPKYIPSAGSGKLGLMKAGETVRTWTAEEKEIGLKAFAR 9 strcl-CVM4 38.4% GSRFPLITPQDNVAAQHRLLTEELGVRELALVTGWSMGAAHAYQWAVSHPGMVRRIAPICGAPVSSPHSLVLLSGLAAALSAD---AG-----------------------ERGRKAAGR 10 solus-q43s18 35.3% GPRFPVMTIRDNVEAVHRLLTEDLKVTHLRAVIGFSMGAQQAFQWAVSYPDFADRIVATSGTAKTYPHGIVRLEGQIAALTAD---AAFLNGDY-------------TSPPKKGLEAFGM 11 9noca-q6rej1 33.5% MSKFPHVRIGDNVVAQERLLREHFGIERLALVTGGSMGAQQTYEWAVRFPDKVLRAAPIAGTAQNTPGDFLIAEAMREAIQSS---PGWNGGEYT-----------SNEQVVDGLIRQAH 12 corgl-CGL0839 34.8% MSKFPNVRIGDDVVAQDRLLRQEFGITELFAVVGGSMGAQQTYEWIVRFPDQVHRAAPIAGTAKNTPHDFIFTQTLNETVEAD---PGFNGGEYS-----------SHEEVADGLRRQSH 13 9psed-q0mrg5 34.8% GPGFANVRIGDDVSAQHTLLTEYFGIESLALVVGGSMGAQQTYEWAVRYPDFVKRAAAIAGTARNSEHDFLFTEILIEAITTD---PAFQAGLYR-----------SSSAVAAGLERHAK 14 9burk-q4av60 33.5% GGRPVPVSLHDNVVAQADLV-RALGIEKLFAVIGRSMGAQQAFQWGCLYPDRTGRIFAFCGTPATSTHNRVLLEGMATILEAA---AN------------------SEDSAKDALRNAGR consensus/100% .......p..Dtl.h..tLl...htlpplhhlhGhSMGu.psapWh..aPt.h.hhhshsGss.s..hs.hhhp...t.l.ss...ss.........................th.t.uh consensus/90% ...h..hphhDsV.hQtpLl.t.hGlpplhhlhGhSMGu.QsapWus.aP-hstRhhshsGssts..ashlhhpshhtsl.us...ss....................t....uhct.u+ consensus/80% .t.h..hphhDsV.hQppLlpp.hGIpplthVhGhSMGu.QsapWus.aP-hspRhsshsGoupss.ashlhh-uhttul.us...suh.tt.h..............t.sttGhcthu+ consensus/70% tspFs.hohhDsVtsQccLlpppFGIpcLthVhGaSMGAtQsYpWuspaPDhVcRhsshCGoA+sosHshlhLEulpuALpAD...suapsuta.............st.sptGh+Ahu+ 1 9baci-q2bd09 100.0% VYGGWGLSQAYYREALYRE-MGFD--SLEDFIAGVWEDSFM-KMDPHNVLAMLWTGQYADISANP--AYNGDFDLALRSIKALACVMPGSTDLFCTAADNKYEASLLPNA---VYKPIES 2 mycs2-i7gg46 49.2% VYAGWGFSQAFYWHQEYKK-MGYS--SLEDFLVGFWEGFFLDRRDPNNLLAMLWTWQNGNVGNTPGRGFHGDQVAALKTIKAKMIVAPAEKDLYFPPEDEEFAVKHIPDA---ELRVIPG 3 braja-BLL7862 46.0% VYAGWAMSHGFYRDELWRE-AGFS--SLEDYLVRGWDATFA-RRDANDLLAQIGIWQSGDISRCA--AFGGDLDRALAAIKAHMLLMPGATDRYFDVRDNEDELGRLVNAKSAVLHPIPS 4 brasb-a5et73 47.5% IYAGWAMSYEFYRDEVWRE-QGFA--AQEDYLAATWDTAFA-HRDANNLLAQIAIWQNGDISHCS--AFGGDLDRALSAITAHMLLMPGQTDRYFDWRDNERELPKLVNASSAVLRPIPS 5 glovi-GLL2500 42.2% IYASWAASQAFYREGLYYK-LGYD--SLEDYLQRGWEANYR-KRNPHDLIAMIDTWLRCDVGDNP--IYRGDYCGALAAIRARTLVMPGATDLYFTPEDCAVEAARIPDA---EYRPIPS 6 synp6-q5mzf3 41.4% IYASWAASQAFYRAGIYRQ-QGYS--SLEDYLERGWEANYR-QRDPHDLLAMIDTWLRCDVSDRP--AFGGDLAKALGSITAQTLVMPSTTDLYFTPEDCEAEAQLIPKA---HYCPIPS 7 synjb-q2jhu6 42.3% IYASWAVSQPFFNQKCYES-LGYA--SLEDYLERGWEANYR-RRDPQNLLSMIETWIRCDISDNP--IHRGDYRAALRAIQAQTLVMPAQTDLYFTPEDCRAEAEWIPNA---VYKIIPS 8 aspcl-a1cns2 42.2% VYAGWGFSQAFYREKLYESVLGFK--NLEDFMQNFWEKWGL-SKDPENLLAMLQTWQSWDVSKQA--PYNGDFEKALASIKAKTLVMPGKTDLYFPPEDSEYEVACMKPG-VGELRVFPS 9 strcl-CVM4 38.4% VFAGWGTSRSFWARRAHRE-LGFA--TREEYLTGFWEQVFLSGPGAADLLTMVRTWENTDVGATP--GAGGSVEAALASVTARAVVLPGALDVCFAVEDEKRVADLLPYA---SLEVIPG 10 solus-q43s18 35.3% VWAAWLYSQEWWRRELWRA-SSPAGTTFEQVSNRFRTRF---NADANDYILQARTWQHHDVGATP--GFSGDTERALRSIKVPLLYMPSETDLYFPVGDARFEAPFIPKV---TLMPIPS 11 9noca-q6rej1 33.5% IWAIVGFSTEFWKHEVWRA-MEFD--SKEAFLSGFLEPYFT-AMDPNALLTQSWAWQRGDVARHT----GGDLAAALGRITAKTFVMPIDEDQLFPVRDCVPEQELIKNS---ELRVVED 12 corgl-CGL0839 34.8% LWAAMGFSTEFWKQEAWRR-LGLE--SKESVLADFLDPLFM-SMDPNTLLNNAWKWQHGDVSRHT----GGDLAAALGRVKAKTFVMPISEDMFFPVRDCAAEQALIPGS---ELRVIED 13 9psed-q0mrg5 34.8% LWTLMGWSPEFFRTGRHKA-LGFE--SMQMFVDGFMKRYFA-PMDPNNLLTMAWKWQRGDVSRHT----GGDLAKALGRIKAKTYVMPISHDQFFTVDDCLSEQKMIPNS---EFRPLRS 14 9burk-q4av60 33.5% VYAAWVLSHEFFNDGSWKG----E--RPMDWVSRMILPAFL-EFHRHDILSLIRTWQFADISANA--RFGGNLKNALEAITVPVFLMPISHDLIFPPQDFEECARHLPNS---RTTVLYS consensus/100% las.hhhS..aa.tt.a.t....t..t...h..thh........t.tshl....hh..hslutps....tGs...ALttlps.hhhhP.t.D.hhs.tD......hh..s....h..h.s consensus/90% lau.hshS.taatpt.act..t.t..s.pthh.thhp..hh.thsspslls.h.hW..tDlutps....tGshttALttlps.hhlhP.tpD.hFsstDt..t..hl..u....hpsl.s consensus/80% laAuhuhSptFappthact..uht..shEpaltthhc..ah.thcspslLs.h.tW.psDlutps....tGDhttALttIpA.hhlMPhtpDhhFsspDpt.p.thlstu....hpsl.u consensus/70% laAuWuhSptFa+ctha+p.hGas..ohE-alsthh-shah.phDspsLLs.lhsWQpsDlupps..hasGDhttALtuIpApshVMPuppDhaFsscDschEtthlPsu...ph+sI.S 1 9baci-q2bd09 100.0% MWGHFAGRGIN-SRDNKFIDDNLKSLLSLGKE-------- 2 mycs2-i7gg46 49.2% IYGHFAGGDAN-PEDNKFIDGLVRELLAR----------- 3 braja-BLL7862 46.0% LHGHRAGNPVNNPPDQAFIRAEIAQLLSK----------- 4 brasb-a5et73 47.5% IHGHRAGNPIRIPADRDFIKANILTLLQS----------- 5 glovi-GLL2500 42.2% IWGHRAGNPYQNPEDAAFIRAAVRELLDRPAL-------- 6 synp6-q5mzf3 41.4% IWGHRAGNPSQNPQDESFIRQAVQALLNAEA--------- 7 synjb-q2jhu6 42.3% IWGHRAGNPHQNPEDEAFIRTAVQEFLES----------- 8 aspcl-a1cns2 42.2% IWGHWAGGPGQSKDDVKWLDEQLAEFFKN----------- 9 strcl-CVM4 38.4% VWGHLAGSGGS-AADREFIGGALRRLLDSPVDG------G 10 solus-q43s18 35.3% LWGHTAGAASN-PADAKFLNENIAKFLLIGRQ-------- 11 9noca-q6rej1 33.5% TLGHLGLFGVS-PTYMPQIDRHLGDLLDIEV--------- 12 corgl-CGL0839 34.8% IAGHLGLFNVS-ENYIPQIDKNLKELFES----------- 13 9psed-q0mrg5 34.8% IDGHLGLFGTD-AQMLDQLDAHLAELLSSPAY-------- 14 9burk-q4av60 33.5% IWGHRAGAPNSDAADIAELETAIRGFLLHPAGDACLAPGR consensus/100% h.GHhuh.s.p.......ltt.l.thh............. consensus/90% hhGHhuh.s.p..t....lpttltthh............. consensus/80% lhGHhuh.s.p.st..t.lcttltphLt............ consensus/70% laGHhAGsssp.stD.taIcttltpLLpp........... |
MView 1.56, Copyright © 1997-2013 Nigel P. Brown
#protein: highlight amino acid physicochemical properties
hydrophobic => bright-green { A, G, I, L, M, P, V }
large hydrophobic => dark-green { F, H, W, Y }
cystein => yellow { C }
negative charge => bright-blue { D, E }
positive charge => bright-red { K, R }
polar => purple { N, Q }
small alcohol => dull-blue { S , T }
any => dark-gray { X }
#protein consensus: report conserved physicochemical classes, derived from the Venn diagrams of Taylor W. R. (1986).
# The classification of amino acid conservation.
#J. Theor. Biol. 119:205-218.
alcohol => o { S, T }
aliphatic => l { I, L, V }
aromatic => a { F, H, W, Y }
charged => c { D, E, H, K, R }
hydrophobic => h { A, C, F, G, H, I, K, L, M, R, T, V, W, Y }
negative => - { D, E }
polar => p { C, D, E, H, K, N, Q, R, S, T }
positive => + { H, K, R }
small => s { A, C, D, G, N, P, S, T, V }
tiny => u { A, G, S }
turnlike => t { A, C, D, E, G, H, K, N, Q, R, S, T }