Reference sequence (1): dinqu-pa1 Identities normalised by aligned length. Colored by: consensus/70% and property |
1 dinqu-pa1 100.0% ----MKFITAILVIF---CVYLLSTAGDSKILPLKKLPSKIFGHLKSHVDNTVKKPLKVFGHLKSHVENSVGPLRMNKLTPNCIFGVKSMSMVLFTKNIPDGKYISLDS----DLGRDLD 2 dolma-ppla1 24.8% --------RLIMFV----------------------------------GDPSSS------NELD--------------RFSVCPFSNDTVKMIFLTRENRKHDFYTLDTMNRHNEFKKSI 3 vesaf-PA11 24.7% M---MNLKYLLFFC-LVQALH----------------------YCYAYGDPSLS------NELD--------------RFNPCPYSDDTVKMIILTRENKKHDFYTLNTIKNHNEFKKST 4 vesba-pa1 29.4% -------------------------------------------------------------------------------FNPCPYSDDTVKMIILTRENKKHDFYTLDTIKKHNEFKKST 5 vestr-vest1 30.3% -------------------------------------------------------------------------------FLPIPYSDDTVKMIILTSENKKHDFYTLDTIKKHNELKESI 6 vescr-PA1 31.2% -------------------------------------------------------------------------------FNPCPYSDDTVKMIVLTRENKKYDFYTLDTIKNHNEFKDTI 7 vesge-PA1 33.5% -------------------------------------------------------------------------------GPKCPFNTDTVSMIIETRENRNRDLYTLQTLQNHPEFKEKT 8 vesvu-pa1 26.9% MEENMNLKYLLLFVYFVQVLN----------------------CCYGHGDP-LS------YELD--------------RGPKCPFNSDTVSIIIETRENRNRDLYTLQTLQNHPEFKKKT 9 vesmc-ppla1 31.7% -------------------------------------------------------------------------------GPKCPFNSDTVSIIIETRENRNRDLYTLQTLQNHPEFKKKT 10 vessq-pa1 28.8% -------------------------------------------------------------------------------GSKCPFSDDTVAMVIVTRENRNRDFYTLQTLRNHDEFKKKA 11 dolma-ppla12 34.5% -----------------------------------------------------------------------------GILPECKLVPEEISFVLSTRENRDGVYLTLQKLKNGKMFKNSD 12 vesmg-pa1 28.8% ----MNLKYLLLFFCLVQVLH----------------------YCYSHGDPSLS------NELD------------RGLIPKCKLVPEQISFVLSTRENQNGVFLTLDNLSKGGILPKSD 13 vesve-pa1 33.1% -----------------------------------------------------------------------------GLLPKCKLVPEQISFILSTRENRNGVFLTLDSLKKGGILNKSD 14 polan-pla1 30.8% ------------------------------------------------------------------------------MSPDCTFNEKDIVFYVYSRDKRDGIILKKETLTNYDLFTKST 15 poldo-q6q252 26.3% ----MNFKYSILFICFVKVLD----------------------NCYAADDLTTLRN----GTLD------------RGITPDCTFNEKDIELHVYSRDKRNGIILKKEILKNYDLFQKSQ 16 polpi-pa1 27.1% ----MNFKYSILFICF--------------------------------------------GTLD------------RGLIPECPFNEYDILFFVYTRQQRDGIVLTEETLQNYDLFKKST 17 solin-q68kk0 28.9% ----MRKFAAIFVVFFVQCTHLYSLA-----------------QARAEPDPGVV----------------------EYLKQSCVYGNSSYINVYLYNSRFQG-----KNLGNQQSCQDIN consensus/100% ..................................................................................h.hs..ph..hh..pp..ph.....p.......h.p.. consensus/90% ...............................................................................h..C.hs.pph.hhh.oppp.pt.hhp.pphtp...hpc.. consensus/80% ...............................................................................hs.C.asscslthll.TR-p+pt.hhohpslpphs.hpcpt consensus/70% ...............................................................................hspCsass-slphll.TREN+ptshhTLpolppas.F+cps 1 dinqu-pa1 100.0% LT-KTIYFTAHGFISNVNHSLSNRLSRALVEKD-YTVFSLDWSDAACTTGGLPLVKLLGYPSAVQNTREIGNLMADYVMSLID-HGASLRNMAFIGHSLGSHVCGFASKKIYESGYGKVP 2 dolma-ppla1 24.8% IK-RPVVFITHGFTSSATEKNFVAMSEALMHTGDFLIIMVDWRMAACTD-EYPGLKYMFYKAAVGNTRLVGNFIAMIAKKLVEQYKVPMTNIRLVGHSLGAHISGFAGKRVQELKLGKFS 3 vesaf-PA11 24.7% IK-HQVVFITHGFTSTATAENFLAMAEALLDKGNYLVILIDWRVAACTN-EMAGVKLAYYSYAASNTRLVGNYIATVTKMLVQQYNVPMANIRLIGHSLGAHTSGFAGKKVQELRLGKYS 4 vesba-pa1 29.4% IK-HQVVFITHGFTSSADTENFLAMAKALSDKGNYLVILIDWRVAACTE-EMSGIQLAYYSYAASNTRLVGNYIATVTKMLVQKYNVPMANIRLIGHSLGAHTSGFAGKKVQELGLGKYS 5 vestr-vest1 30.3% IK-HQVAFITHGFTSSATAEHFLAVAEALLDKGNYLVIMIDWRVAACTN-EIAGVKLAYYNYAVSNTRLVGNYIATVTKMLVQKYNVPMANIRLIGHSLGAHISGFAGKKVQELGLGKYS 6 vescr-PA1 31.2% TL-KPHVFITHGFTSSATAENFVVMAKALLDKGNYLVILTDWRMAACTN-EIAGLKLAYYPYAASNTRLVGNYIATVTKMLVQKYNVPMANIRLIGHSLGAHISGFAGKKVQELGLGKYP 7 vesge-PA1 33.5% IT-RPVVFITHGFTSSASETNFINLSKALVDKDNYMVISIDWQTAACTN-EAAGLKYLYYPTAASNTRLVGQYIATITQKLVKQYKISMANIRLIGHSLGAHVSGFAGKKVQELKLGKYS 8 vesvu-pa1 26.9% IT-RPVVFITHGFTSSASETNFINLAKALVDKDNYMVISIDWQTAACTN-EAAGLKYLYYPTAARNTRLVGQYIATITQKLVKHYKISMANIRLIGHSLGAHASGFAGKKVQELKLGKYS 9 vesmc-ppla1 31.7% IT-RPVVFITHGFTSSASEKNFINLAKALVDKDNYMVISIDWQTAACTN-EYPGLKYAYYPTAASNTRLVGQYIATITQKLVKDYKISMANIRLIGHSLGAHVSGFAGKRVQELKLGKYS 10 vessq-pa1 28.8% IT-RPVVFITHGFTSSATVESFVDLQTAILEXXXXKVTVSDWRVAACNR-TTG---LLYYVTAVSNTRLVGRYIATVTKKLVTDYNVSMADIRLIGHSLGAHVSGFAGKEVQKLKLEKYS 11 dolma-ppla12 34.5% LSSKKVPFLIHGFISSATNKNYADMTRALLDKDDIMVISIDWRDGACSN-EFALLKFIGYPKAVENTRAVGKYIADFSKILIQKYKVLLENIRLIGHSLGAQIAGFAGKEFQRFKLGKYP 12 vesmg-pa1 28.8% LSSIPVIFLIHGFISSANNSNYVDMTKALLEKNDCMVISIDWRDGACTH-EFKILKFIGYPNAVKNTRAVGKYIADFTKLLMQKYKVSLANIRLIGHSLGAQIAGFAGKEYQKFKLGKYP 13 vesve-pa1 33.1% LSSTQVVFLIHGFISSANNSNYMDMTKALLEKNDCMVISIDWRNGACTN-EFQILKFIGYPKAVENTRTVGKYIADFSKLLMQKYKVSLANIRLIGHSLGAQIAGFAGKEYQKFKLGKYP 14 polan-pla1 30.8% IS-KQVVFLIHGFLSTGNNENFVAMSKALIEKDDFLVISVDWKKGACNA-FASTKDALGYSKAVGNTRHVGKFVADFTKLLVEKYKVLISNIRLIGHSLGAHTSGFAGKEVQKLKLGKYK 15 poldo-q6q252 26.3% IS-HQIAILIHGFLSTGNNENFDAMAKALIEIDNFLVISVDWKKGACNA-FASTNDVLGYSQAVGNTRHVGKYVADFTKLLVEQYKVPMSNIRLIGHSLGAHTSGFAGKEVQRLKLGKYK 16 polpi-pa1 27.1% IS-RQVVFIDHGFLSNGNNENFIAMAKALIEKDNFLVISVDWKKGACNA-FASTLDYLGYSTAVGNTRHVGKYVADFTKLLVEQYKVSMSNIRLIGHSLGAHTSGFAGKEVQELKLNKYS 17 solin-q68kk0 28.9% AS-LPVVFITHGFTSSAQVSTFKDLANAFVQKGHTAFI-VDWSEAACTD-GLPGVQFAEYNAAASNTYDIGQLMAKYTVDLMNKCKIPLNNIQYVGHSLGSHVCGFAAKHVKKLINKTMP consensus/100% h..h.h.hh.HGFhSssp.p....htpAh.p....hhh..DWp.uACst..h....hh.Y..AstNTh.lGphhA.hs..Lhp.hth.htshthlGHSLGuphsGFAuKch.c.h.tph. consensus/90% hp.h.lhFlhHGFhSsus.ppa.shspAlhchs.hhlh.hDWp.uACst..h.h.phhhYs.AstNTR.lGphhAphs..Lhppapl.htNIphlGHSLGuphsGFAuKchpchthtKh. consensus/80% lp.+.VsFlhHGFhSoustpsahshscALl-KsshhVI.lDWp.uACss.thshlchhhYshAstNTRhVGpalAshophLlppYplshsNIRLIGHSLGAHhuGFAGKclQchtLGKYs consensus/70% lo.+.VVFlsHGFhSSAsspNFlshu+ALl-KssahVI.lDW+huACTs.phsslchhhYstAsuNTRhVGpYIAshTKhLVppYpVshuNIRLIGHSLGAHhSGFAGKcVQcL+LGKYs 1 dinqu-pa1 100.0% LLFAADPAQPLFQLKQCPDRLCDTDAKLVITLHTSQ-IGLGYPIGGLDLYFNGGFVQPKCHL---DITCAHIRSVLYLINMVEKKCSFPGIPATYKQILNPF---------SK---FPYP 2 dolma-ppla1 24.8% EIIGLDPAGPSFKKNDCSERICETDAHYVQILHTSSNLGTERTLGTVDFYINNGSNQPGCRY-IIGETCSHTRAVKYFTECIRRECCLIGVPQ------------------SK---NPQP 3 vesaf-PA11 24.7% EIIGLDPAGPSFKSQECSQRICETDANYVQIIHTSNHLGTLVTLGTVDFYMNNGYNQPGCGLPIIGETCSHTRAVKYFTECIRHECCLIGVPQ------------------SK---NPQP 4 vesba-pa1 29.4% EIIGLDPAGPSFKSNDCSERICKTDAHYVQIIHTSNHLGTLVTLGTVDF-MNNGYNQPGCGLPLIGETCSHTRAVKYFTECIKHECCLIGVPQ------------------SK---KPQP 5 vestr-vest1 30.3% EIIGLDPAGPSFKSQECSQRICETDANYVQIIHTSNHLGTERTLGTVDFYMNNGKNQPGCGLPIIGETCSHTRAVKYFTECIRHECCLIGVPQ------------------SK---NPQP 6 vescr-PA1 31.2% EIIGLDPAGPSFKSNDCSQRICETDANYVQIIHTSNRLGTERTLGTVDFYMNNGYNQPGCGLPIIGETCSHTRAVKYFTECIKHECCLIGVPK------------------SK---NPQP 7 vesge-PA1 33.5% EIIGLDPAGPSFSSNKCSDRLCETDAEYVQILHTSNHLGTERILGTVDFYMNNGKNQPGCGR-FFTEVCSHSRAVIYMAECIKHECCLIGIPK------------------SK---SSQP 8 vesvu-pa1 26.9% EIIGLDPARPSFDSNHCSERLCETDAEYVQIIHTSNYLGTEKTLGTVDFYMNNGKNQPGCGR-FFSEVCSHSRAVIYMAECIKHECCLIGIPK------------------SK---SSQP 9 vesmc-ppla1 31.7% EIIGLDPARPSFDSNHCSERLCETDAEYVQIIHTSNYLGTEKILGTVDFYMNNGKNNPGCGR-FFSEVCSHTRAVIYMAECIKHECCLIGIPR------------------SK---SSQP 10 vessq-pa1 28.8% EIIGLDPAGPSFESNDCAERLCKTDAHYVQIIHTSKKFGIEKSIGHVDFYVNQGNNQPGCGIIPLKDVCSHSRAITYMTECIKRECCLIGIPQ------------------SK---SSKS 11 dolma-ppla12 34.5% EIIGLDPAGPSFKKKDCPERICETDAHYVQILHTSSNLGTERTLGTVDFYINDGSNQPGCTY-IIGETCSHTRAVKYLTECIRRECCLIGVPQ------------------SK---NPQP 12 vesmg-pa1 28.8% EIIGLDPAGPLFKSNDCSERICETDAHYVQIIHTSNNLGTERTLGTVDFYVNNGYNQPGCYLSFLGEACSHTRAVKYFTECIRHECCLIGVPQ------------------SK---NPQP 13 vesve-pa1 33.1% EIIGLDPAGPLFKSNDCSQRICETDAHYVQIIHTSNNLGTERTLGTVDFYMNNGYNQPGCYYSFIGETCSHTRAVQYFTECIRHECCLIGVPQ------------------SK---NPQP 14 polan-pla1 30.8% EIIGLDPAGPYFHRSDCPDRLCVTDAEYVQVIHTSIILGVYYNVGSVDFYVNYGKNQPGCN----EPSCSHTKAVKYLTECIKHECCLIGTPW------------------KKYFSTPKP 15 poldo-q6q252 26.3% EIIGLDPAGPSFLTNKCPNRLCETDAEYVQAIHTSAILGVYYNVGSVDFYVNYGKSQPGCS----EPSCSHTKAVKYLTECIKRECCLIGTPW------------------KSYFSTPKP 16 polpi-pa1 27.1% NIDGLDPAGPSFDSNDCPERLCETDAEYVQIIHTSNILGVYSKIGTVDFYMNYGSHQPGCGR-FFSPSCSHTKAVKYLTECIKHECCLIGTPW------------------KKYFSTPKP 17 solin-q68kk0 28.9% YILALDPADPSFGSNKCGERICKSDAKRIVVFKTSILGIGENIIGHLLIVFDGGKSQPACSW--YDVPCSHSESIVYATGMVSGRCQHLAVPWTAQQRINPIQWKFWRVFTSNI--PAYP consensus/100% .l.uhDPAtP.F..ppCspRlC.oDAphl.hh+TS..hhh...lGtl.h.hs.G..pPtC.....t.sCuH.cul.YhhthlptcCph.uhP...................pp....s.s consensus/90% .IhuLDPAtP.FtppcCspRlCcTDAphV.hlHTS..hGh...lGplDhhhN.G.sQPuC.....t.sCSHo+ulhYhsphlc+cCshlGhP...................pp....s.P consensus/80% EIIGLDPAsP.FpppcCspRlCcTDAcYVQllHTSp.LGs.h.lGoVDFYhNtG.sQPGCth..hs.sCSHo+AVhYhsECI++ECCLIGlP...................SK...sspP consensus/70% EIIGLDPAGPSFcSNcCu-RlCETDAcYVQIIHTSshLGstpslGTVDFYhNsGhNQPGCsh.hhs-sCSHTRAVpYhTECI++ECCLIGlPp..................SK...sPpP 1 dinqu-pa1 100.0% NSKTTD----CFVMDDSIFNPRRKSLQNLAGGIYYMFVDPD-TFCTRKNFNC-QR 2 dolma-ppla1 24.8% VSKCTRNECVCVGLNAKKYPKR---------GSFYVPVEAEAPYCNNNGKII--- 3 vesaf-PA11 24.7% VSKCTRNECVCVGLNAKTYPKT---------GSFYVPVESKAPYCNNKGKII--- 4 vesba-pa1 29.4% VSKCTRNECVCVGLNAKTYPKT---------GSFYVPVESKAPYCNNKGKII--- 5 vestr-vest1 30.3% VSKCTRNECVCVGLNAKTYPKT---------GSFYVPVESKAPYCNNKGKKI--- 6 vescr-PA1 31.2% VSKCTRNECVCVGLNAKTYPKT---------GSFYVPVESKAPYCNNKGKII--- 7 vesge-PA1 33.5% ISSCTKQECVCVGLNAKKYPSR---------GSFYVPVESTAPFCNNKGKII--- 8 vesvu-pa1 26.9% ISSCTKQECVCVGLNAKKYPSR---------GSFYVPVESTAPFCNNKGKII--- 9 vesmc-ppla1 31.7% ISRCTKQECVCVGLNAKKYPSR---------GSFYVPVESTAPFCNNKGKII--- 10 vessq-pa1 28.8% ISSCTRQECVCVGLKAKSYPNT---------GSFYVPVESTAPFCNNKGKII--- 11 dolma-ppla12 34.5% VSKCTRNECVCVGLNAKEYPKK---------GSFYVPVEAKAPFCNNNGKII--- 12 vesmg-pa1 28.8% VSKCTRKECVCIGLNAKTYPKT---------GSFYVPVESKAPYCNNKGKKI--- 13 vesve-pa1 33.1% VSKCTRNECVCVGLNAKRYPKT---------GSFYVPVESKAPYCNNKGKKI--- 14 polan-pla1 30.8% ISQCRGDTCVCVGLNAKSYPAR---------GAFYAPVEANAPYCHNEGIKL--- 15 poldo-q6q252 26.3% ISQCKRDTCVCVGLNAQSYPAK---------GSFYVPVDKDAPYCHNEGIKL--- 16 polpi-pa1 27.1% ISQCTKDTCVCVGLNAKSYPAR---------GSFYVPVEATAPYCHNEGIKL--- 17 solin-q68kk0 28.9% TSDTTN----CVVLNTNVFKND---------NTFEGEYHAF-PDCARNLFKCRQQ consensus/100% .Spspt....Chshpsp.a..p.........s.a.h.hc...s.Ctpp.h.h... consensus/90% hSpspp....ClsLssp.astp.........GsFYs.V-sp.PaCpppshhh... consensus/80% lSpCT+ppCVCVGLNAKpYPtp.........GSFYVPVEupAPaCsNcGhhl... consensus/70% lSpCT+pECVCVGLNAKpYPpp.........GSFYVPVEupAPaCNNcGKhI... |
MView 1.56, Copyright © 1997-2013 Nigel P. Brown
#protein: highlight amino acid physicochemical properties
hydrophobic => bright-green { A, G, I, L, M, P, V }
large hydrophobic => dark-green { F, H, W, Y }
cystein => yellow { C }
negative charge => bright-blue { D, E }
positive charge => bright-red { K, R }
polar => purple { N, Q }
small alcohol => dull-blue { S , T }
any => dark-gray { X }
#protein consensus: report conserved physicochemical classes, derived from the Venn diagrams of Taylor W. R. (1986).
# The classification of amino acid conservation.
#J. Theor. Biol. 119:205-218.
alcohol => o { S, T }
aliphatic => l { I, L, V }
aromatic => a { F, H, W, Y }
charged => c { D, E, H, K, R }
hydrophobic => h { A, C, F, G, H, I, K, L, M, R, T, V, W, Y }
negative => - { D, E }
polar => p { C, D, E, H, K, N, Q, R, S, T }
positive => + { H, K, R }
small => s { A, C, D, G, N, P, S, T, V }
tiny => u { A, G, S }
turnlike => t { A, C, D, E, G, H, K, N, Q, R, S, T }