Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: 9firm-b9y779

Holdemania filiformis DSM 12042 Putative uncharacterized protein

Relationship
Family|Bacterial_EstLip_FamX
Block| X
Position in NCBI Life Tree|Holdemania filiformis DSM 12042
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Firmicutes: N E > Erysipelotrichia: N E > Erysipelotrichales: N E > Erysipelotrichaceae: N E > Holdemania: N E > Holdemania filiformis: N E > Holdemania filiformis DSM 12042: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : ACCF01000093
1 UniProt : B9Y779
1 UniProt : B9Y779
1 Interpro : B9Y779
1 Pfam : B9Y779
1 PIRSF : B9Y779
1 SUPERFAM : B9Y779
Sequence
Graphical view for this peptide sequence: 9firm-b9y779
Colored MSA for Bacterial_EstLip_FamX (raw)
MNKSIKKGFIGLLLLSVVLSGCQKTPAPAESNQPGTDVQDKVTGSREEIA
KAYVETLGAGDFDKLLQGFAYDEQMQKASSQLQASLEPSLKQLGALKEIQ
TANEIQQGGYIIVQVPVLFENQNLCVNVVFDDQDQIAGVNFSEYVEPSNV
AALTLPEGAAEQELTLTMRDGKDLPATLTLPQGDQPAPVIILVHGSGPND
RNETLYGNTVFQDIAYRLAEQGIATVRYDKRTFVYGAECAGDTQFTVEQE
TIQDAVDIVGLIAKQPEIDSSAIYVLGHSLGGLCMPRIAAETPEAAGYIM
MAAPVTDLASLMKMQYEHLAQFMNTDQEKASMEAMIAELDKLQQLDSLSE
DEAVVGAYPAYWKDLLSYDPVKTAETITKPVLVLQGEEDYQVPLQEFETW
KAAYGEKANWTFHSYSGLSHLMMPGDFDANPNTYYMQKAVVDPRVTDDIA
AFIHAQK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MNKSIKKGFIGLLLLSVVLSGCQKTPAPAESNQPGTDVQDKVTGSREEIA
KAYVETLGAGDFDKLLQGFAYDEQMQKASSQLQASLEPSLKQLGALKEIQ
TANEIQQGGYIIVQVPVLFENQNLCVNVVFDDQDQIAGVNFSEYVEPSNV
AALTLPEGAAEQELTLTMRDGKDLPATLTLPQGDQPAPVIILVHGSGPND
RNETLYGNTVFQDIAYRLAEQGIATVRYDKRTFVYGAECAGDTQFTVEQE
TIQDAVDIVGLIAKQPEIDSSAIYVLGHSLGGLCMPRIAAETPEAAGYIM
MAAPVTDLASLMKMQYEHLAQFMNTDQEKASMEAMIAELDKLQQLDSLSE
DEAVVGAYPAYWKDLLSYDPVKTAETITKPVLVLQGEEDYQVPLQEFETW
KAAYGEKANWTFHSYSGLSHLMMPGDFDANPNTYYMQKAVVDPRVTDDIA
AFIHAQK



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer