longtext: 1H2X-pdb

content
HEADER    HYDROLASE                               20-AUG-02   1H2X
TITLE     PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN, Y473F MUTANT
COMPND    MOL_ID: 1;
COMPND   2 MOLECULE: PROLYL ENDOPEPTIDASE;
COMPND   3 SYNONYM: POST-PROLINE CLEAVING ENZYME, PE;
COMPND   4 EC: 3.4.21.26;
COMPND   5 CHAIN: A;
COMPND   6 MUTATION: YES;
COMPND   7 ENGINEERED: YES;
COMPND   8 OTHER_DETAILS: ENGINEERED MUTATION TYR 473 PHE
SOURCE    MOL_ID: 1;
SOURCE   2 SYNTHETIC: YES;
SOURCE   3 ORGANISM_SCIENTIFIC: SUS SCROFA;
SOURCE   4 ORGANISM_COMMON: PIG;
SOURCE   5 TISSUE: BRAIN;
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI
KEYWDS    HYDROLASE, PROLYL OLIGOPEPTIDASE, AMNESIA, ALPHA/
KEYWDS   2 BETA-HYDROLASE, BETA-PROPELLER, SERINE PROTEASE
EXPDTA    X-RAY DIFFRACTION
AUTHOR    V.FULOP
REVDAT   1   11-NOV-02 1H2X    0
JRNL        AUTH   Z.SZELTNER,D.REA,V.RENNER,V.FULOP,L.POLGAR
JRNL        TITL   ELECTROSTATIC EFFECTS AND BINDING DETERMINANTS IN
JRNL        TITL 2 THE CATALYSIS OF PROLYL OLIGOPEPTIDASE: SITE
JRNL        TITL 3 SPECIFIC MUTAGENESIS AT THE OXYANION BINDING SITE
JRNL        REF    J.BIOL.CHEM.                  V. 277 42613 2002
JRNL        REFN   ASTM JBCHA3  US ISSN 0021-9258
REMARK   1
REMARK   1 REFERENCE 1
REMARK   1  AUTH   V.FULOP,Z.SZELTNER,V.RENNER,L.POLGAR
REMARK   1  TITL   STRUCTURES OF PROLYL OLIGOPEPTIDASE SUBSTRATE/
REMARK   1  TITL 2 INHIBITOR COMPLEXES. USE OF INHIBITOR BINDING FOR
REMARK   1  TITL 3 TITRATION OF THE CATALYTIC HISTIDINE RESIDUE
REMARK   1  REF    J.BIOL.CHEM.                  V. 276  1262 2001
REMARK   1  REFN   ASTM JBCHA3  US ISSN 0021-9258
REMARK   1 REFERENCE 2
REMARK   1  AUTH   V.FULOP,Z.SZELTNER,L.POLGAR
REMARK   1  TITL   CATALYSIS OF SERINE OLIGOPEPTIDASES IS CONTROLLED
REMARK   1  TITL 2 BY A GATING FILTER MECHANISM
REMARK   1  REF    EMBO REPORTS                  V.   1   277 2000
REMARK   1  REFN   ASTM         UK ISSN 1469-3178
REMARK   1 REFERENCE 3
REMARK   1  AUTH   V.FULOP,Z.BOCSKEI,L.POLGAR
REMARK   1  TITL   PROLYL OLIGOPEPTIDASE: AN UNUSUAL BETA-PROPELLER
REMARK   1  TITL 2 DOMAIN REGULATES PROTEOLYSIS
REMARK   1  REF    CELL(CAMBRIDGE,MASS.)         V.  94   161 1998
REMARK   1  REFN   ASTM CELLB5  US ISSN 0092-8674
REMARK   2
REMARK   2 RESOLUTION. 1.49 ANGSTROMS.
REMARK   3
REMARK   3 REFINEMENT.
REMARK   3   PROGRAM     : X-PLOR 3.851
REMARK   3   AUTHORS     : BRUNGER
REMARK   3
REMARK   3  DATA USED IN REFINEMENT.
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.49
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 26.0
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 2.0
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : NULL
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : NULL
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 99.4
REMARK   3   NUMBER OF REFLECTIONS             : 127909
REMARK   3
REMARK   3  FIT TO DATA USED IN REFINEMENT.
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM
REMARK   3   R VALUE            (WORKING SET) : 0.175
REMARK   3   FREE R VALUE                     : 0.196
REMARK   3   FREE R VALUE TEST SET SIZE   (%) :  4.0
REMARK   3   FREE R VALUE TEST SET COUNT      : 5215
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : NULL
REMARK   3
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.
REMARK   3   TOTAL NUMBER OF BINS USED           : NULL
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : NULL
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : NULL
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : NULL
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : NULL
REMARK   3   BIN R VALUE           (WORKING SET) : NULL
REMARK   3   BIN FREE R VALUE                    : NULL
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : NULL
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : NULL
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK   3
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK   3   PROTEIN ATOMS            : 5700
REMARK   3   NUCLEIC ACID ATOMS       : 0
REMARK   3   HETEROGEN ATOMS          : 24
REMARK   3   SOLVENT ATOMS            : 1065
REMARK   3
REMARK   3  B VALUES.
REMARK   3   FROM WILSON PLOT           (A**2) : 12.4
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 9.7
REMARK   3   OVERALL ANISOTROPIC B VALUE.
REMARK   3    B11 (A**2) : NULL
REMARK   3    B22 (A**2) : NULL
REMARK   3    B33 (A**2) : NULL
REMARK   3    B12 (A**2) : NULL
REMARK   3    B13 (A**2) : NULL
REMARK   3    B23 (A**2) : NULL
REMARK   3
REMARK   3  ESTIMATED COORDINATE ERROR.
REMARK   3   ESD FROM LUZZATI PLOT        (A) : NULL
REMARK   3   ESD FROM SIGMAA              (A) : 0.09
REMARK   3   LOW RESOLUTION CUTOFF        (A) : NULL
REMARK   3
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : NULL
REMARK   3   ESD FROM C-V SIGMAA          (A) : NULL
REMARK   3
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.
REMARK   3   BOND LENGTHS                 (A) : 0.007
REMARK   3   BOND ANGLES            (DEGREES) : 1.4
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : NULL
REMARK   3   IMPROPER ANGLES        (DEGREES) : NULL
REMARK   3
REMARK   3  ISOTROPIC THERMAL MODEL : NULL
REMARK   3
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA
REMARK   3   MAIN-CHAIN BOND              (A**2) : NULL  ; NULL
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : NULL  ; NULL
REMARK   3   SIDE-CHAIN BOND              (A**2) : NULL  ; NULL
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : NULL  ; NULL
REMARK   3
REMARK   3  NCS MODEL : NULL
REMARK   3
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL
REMARK   3
REMARK   3  PARAMETER FILE  1  : NULL
REMARK   3  TOPOLOGY FILE  1   : NULL
REMARK   3
REMARK   3  OTHER REFINEMENT REMARKS: NULL
REMARK   4
REMARK   4 1H2X COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY EBI  ON 20-AUG-2002.
REMARK 100 THE EBI ID CODE IS EBI-11274.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION
REMARK 200  DATE OF DATA COLLECTION        : 15-JUN-2000
REMARK 200  TEMPERATURE           (KELVIN) : 100.0
REMARK 200  PH                             : 8.5
REMARK 200  NUMBER OF CRYSTALS USED        : 1
REMARK 200
REMARK 200  SYNCHROTRON              (Y/N) : Y
REMARK 200  RADIATION SOURCE               : MAX-LAB BEAMLINE 711
REMARK 200  BEAMLINE                       : BL-711
REMARK 200  X-RAY GENERATOR MODEL          : NULL
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.021
REMARK 200  MONOCHROMATOR                  : NULL
REMARK 200  OPTICS                         : MIRRORS
REMARK 200
REMARK 200  DETECTOR TYPE                  : IMAGE PLATE
REMARK 200  DETECTOR MANUFACTURER          : MARRESEARCH
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : DENZO
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK
REMARK 200
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 128812
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.49
REMARK 200  RESOLUTION RANGE LOW       (A) : 26.0
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : -3.0
REMARK 200
REMARK 200 OVERALL.
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.4
REMARK 200  DATA REDUNDANCY                : 4.2
REMARK 200  R MERGE                    (I) : 0.036
REMARK 200  R SYM                      (I) : NULL
REMARK 200   FOR THE DATA SET  : 37.2
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.49
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.54
REMARK 200  COMPLETENESS FOR SHELL     (%) : 97.3
REMARK 200  DATA REDUNDANCY IN SHELL       : 3.2
REMARK 200  R MERGE FOR SHELL          (I) : 0.097
REMARK 200  R SYM FOR SHELL            (I) : NULL
REMARK 200   FOR SHELL         : 9.6
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: CCP4, X-PLOR
REMARK 200 STARTING MODEL: PDB ENTRY 1QFM
REMARK 200
REMARK 200 REMARK: NONE
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS  (%): 44.0
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.5
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: SEE REFERENCE 3
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21
REMARK 290
REMARK 290      SYMOP   SYMMETRY
REMARK 290     NNNMMM   OPERATOR
REMARK 290       1555   X,Y,Z
REMARK 290       2555   1/2-X,-Y,1/2+Z
REMARK 290       3555   -X,1/2+Y,1/2-Z
REMARK 290       4555   1/2+X,1/2-Y,-Z
REMARK 290
REMARK 290     WHERE NNN -> OPERATOR NUMBER
REMARK 290           MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       35.60000
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       55.55000
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       49.90000
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       55.55000
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       35.60000
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       49.90000
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT
REMARK 300 WHICH CONSISTS OF   1 CHAIN(S). SEE REMARK 350 FOR
REMARK 300 INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S).
REMARK 300
REMARK 300 QUATERNARY STRUCTURE FOR THIS ENTRY: MONOMERIC
REMARK 350
REMARK 350 GENERATING THE BIOMOLECULE
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE:  1
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000
REMARK 400
REMARK 400 COMPOUND
REMARK 400  CLEAVES PEPTIDE BONDS ON THE C-TERMINAL SIDE OF PROLYL
REMARK 400  RESIDUES WITHIN PEPTIDES OF UP TO APPROXIMATELY 30 AMINO
REMARK 400  ACIDS IN LENGTH. BELONGS TO PEPTIDASE FAMILY S9A.
REMARK 400
REMARK 400  CHAIN A ENGINEERED MUTATION TYR 473 PHE
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991
REMARK 500
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3
REMARK 500    ASN A  91   N   -  CA  -  C   ANGL. DEV. =  -8.8 DEGREES
REMARK 500    VAL A 125   N   -  CA  -  C   ANGL. DEV. =  -9.6 DEGREES
REMARK 500    THR A 152   N   -  CA  -  C   ANGL. DEV. =  -9.7 DEGREES
REMARK 500    LYS A 157   N   -  CA  -  C   ANGL. DEV. = -11.1 DEGREES
REMARK 500    SER A 174   N   -  CA  -  C   ANGL. DEV. =   8.7 DEGREES
REMARK 500    VAL A 247   N   -  CA  -  C   ANGL. DEV. = -10.0 DEGREES
REMARK 500    ARG A 260   N   -  CA  -  C   ANGL. DEV. =  -9.3 DEGREES
REMARK 500    VAL A 280   N   -  CA  -  C   ANGL. DEV. =  -9.5 DEGREES
REMARK 500    GLU A 296   N   -  CA  -  C   ANGL. DEV. = -10.1 DEGREES
REMARK 500    LYS A 303   N   -  CA  -  C   ANGL. DEV. = -10.7 DEGREES
REMARK 500    ASP A 320   N   -  CA  -  C   ANGL. DEV. =  -8.8 DEGREES
REMARK 500    PRO A 321   N   -  CA  -  C   ANGL. DEV. =  12.8 DEGREES
REMARK 500    LEU A 338   N   -  CA  -  C   ANGL. DEV. =  -8.8 DEGREES
REMARK 500    LEU A 351   CA  -  CB  -  CG  ANGL. DEV. =  11.9 DEGREES
REMARK 500    THR A 360   N   -  CA  -  C   ANGL. DEV. =  -9.1 DEGREES
REMARK 500    VAL A 382   N   -  CA  -  C   ANGL. DEV. = -10.3 DEGREES
REMARK 500    PRO A 467   N   -  CA  -  C   ANGL. DEV. =  -8.9 DEGREES
REMARK 500    GLY A 600   N   -  CA  -  C   ANGL. DEV. =  -8.9 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500  M RES CSSEQI        PSI       PHI
REMARK 500
REMARK 500    TYR A 311      151.81     73.03
REMARK 500    SER A 346      -60.39     68.24
REMARK 500    SER A 554     -117.67     64.81
REMARK 500    THR A 590     -111.57     31.61
REMARK 525
REMARK 525 SOLVENT
REMARK 525
REMARK 525 THE SOLVENT MOLECULES ARE GIVEN CHAIN IDENTIFIERS TO
REMARK 525 INDICATE THE PROTEIN CHAIN TO WHICH THEY ARE MOST CLOSELY
REMARK 525 ASSOCIATED WITH:
REMARK 525   PROTEIN CHAIN  SOLVENT CHAIN
REMARK 525     A              Z
REMARK 700
REMARK 700 SHEET
REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN
REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW,
REMARK 700 TWO SHEETS ARE DEFINED.
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AS1
REMARK 800 SITE_DESCRIPTION: ACTIVE SITE: CATALYTIC TRIAD
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 SITE_DESCRIPTION: GOL BINDING SITE FOR CHAIN A
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 SITE_DESCRIPTION: GOL BINDING SITE FOR CHAIN A
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 SITE_DESCRIPTION: GOL BINDING SITE FOR CHAIN A
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 SITE_DESCRIPTION: GOL BINDING SITE FOR CHAIN A
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1E5T   RELATED DB: PDB
REMARK 900  PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN,
REMARK 900  MUTANT
REMARK 900 RELATED ID: 1E8M   RELATED DB: PDB
REMARK 900  PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN,
REMARK 900  MUTANT, COMPLEXED WITH INHIBITOR
REMARK 900 RELATED ID: 1E8N   RELATED DB: PDB
REMARK 900  PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN,
REMARK 900  MUTANT, COMPLEXED WITH PEPTIDE
REMARK 900 RELATED ID: 1H2W   RELATED DB: PDB
REMARK 900  PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN
REMARK 900 RELATED ID: 1H2Y   RELATED DB: PDB
REMARK 900  PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN,
REMARK 900  Y473F MUTANT WITH COVALENTLY BOUND INHIBITOR
REMARK 900  Z-PRO-PROLINAL
REMARK 900 RELATED ID: 1H2Z   RELATED DB: PDB
REMARK 900  PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN,
REMARK 900  S554A MUTANT BOUND PEPTIDE LIGAND SUC-GLY-PRO
REMARK 900 RELATED ID: 1O6F   RELATED DB: PDB
REMARK 900  PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN,
REMARK 900  D641A MUTANT WITH BOUND PEPTIDE LIGAND SUC-
REMARK 900  GLY-PRO
REMARK 900 RELATED ID: 1O6G   RELATED DB: PDB
REMARK 900  PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN,
REMARK 900  D641N MUTANT WITH BOUND PEPTIDE LIGAND SUC-
REMARK 900  GLY-PRO
REMARK 900 RELATED ID: 1QFM   RELATED DB: PDB
REMARK 900  PROLYL OLIGOPEPTIDASE FROM PORCINE MUSCLE
REMARK 900 RELATED ID: 1QFS   RELATED DB: PDB
REMARK 900  PROLYL OLIGOPEPTIDASE FROM PORCINE MUSCLE WITH
REMARK 900   COVALENTLY BOUND INHIBITOR Z-PRO-PROLINAL
DBREF  1H2X A    1   710  SWS    P23687   PPCE_PIG         1    710
SEQADV 1H2X PHE A  473  SWS  P23687    TYR   473 ENGINEERED MUTATION
SEQRES   1 A  710  MET LEU SER PHE GLN TYR PRO ASP VAL TYR ARG ASP GLU
SEQRES   2 A  710  THR ALA ILE GLN ASP TYR HIS GLY HIS LYS VAL CYS ASP
SEQRES   3 A  710  PRO TYR ALA TRP LEU GLU ASP PRO ASP SER GLU GLN THR
SEQRES   4 A  710  LYS ALA PHE VAL GLU ALA GLN ASN LYS ILE THR VAL PRO
SEQRES   5 A  710  PHE LEU GLU GLN CYS PRO ILE ARG GLY LEU TYR LYS GLU
SEQRES   6 A  710  ARG MET THR GLU LEU TYR ASP TYR PRO LYS TYR SER CYS
SEQRES   7 A  710  HIS PHE LYS LYS GLY LYS ARG TYR PHE TYR PHE TYR ASN
SEQRES   8 A  710  THR GLY LEU GLN ASN GLN ARG VAL LEU TYR VAL GLN ASP
SEQRES   9 A  710  SER LEU GLU GLY GLU ALA ARG VAL PHE LEU ASP PRO ASN
SEQRES  10 A  710  ILE LEU SER ASP ASP GLY THR VAL ALA LEU ARG GLY TYR
SEQRES  11 A  710  ALA PHE SER GLU ASP GLY GLU TYR PHE ALA TYR GLY LEU
SEQRES  12 A  710  SER ALA SER GLY SER ASP TRP VAL THR ILE LYS PHE MET
SEQRES  13 A  710  LYS VAL ASP GLY ALA LYS GLU LEU PRO ASP VAL LEU GLU
SEQRES  14 A  710  ARG VAL LYS PHE SER CYS MET ALA TRP THR HIS ASP GLY
SEQRES  15 A  710  LYS GLY MET PHE TYR ASN ALA TYR PRO GLN GLN ASP GLY
SEQRES  16 A  710  LYS SER ASP GLY THR GLU THR SER THR ASN LEU HIS GLN
SEQRES  17 A  710  LYS LEU TYR TYR HIS VAL LEU GLY THR ASP GLN SER GLU
SEQRES  18 A  710  ASP ILE LEU CYS ALA GLU PHE PRO ASP GLU PRO LYS TRP
SEQRES  19 A  710  MET GLY GLY ALA GLU LEU SER ASP ASP GLY ARG TYR VAL
SEQRES  20 A  710  LEU LEU SER ILE ARG GLU GLY CYS ASP PRO VAL ASN ARG
SEQRES  21 A  710  LEU TRP TYR CYS ASP LEU GLN GLN GLU SER ASN GLY ILE
SEQRES  22 A  710  THR GLY ILE LEU LYS TRP VAL LYS LEU ILE ASP ASN PHE
SEQRES  23 A  710  GLU GLY GLU TYR ASP TYR VAL THR ASN GLU GLY THR VAL
SEQRES  24 A  710  PHE THR PHE LYS THR ASN ARG HIS SER PRO ASN TYR ARG
SEQRES  25 A  710  LEU ILE ASN ILE ASP PHE THR ASP PRO GLU GLU SER LYS
SEQRES  26 A  710  TRP LYS VAL LEU VAL PRO GLU HIS GLU LYS ASP VAL LEU
SEQRES  27 A  710  GLU TRP VAL ALA CYS VAL ARG SER ASN PHE LEU VAL LEU
SEQRES  28 A  710  CYS TYR LEU HIS ASP VAL LYS ASN THR LEU GLN LEU HIS
SEQRES  29 A  710  ASP LEU ALA THR GLY ALA LEU LEU LYS ILE PHE PRO LEU
SEQRES  30 A  710  GLU VAL GLY SER VAL VAL GLY TYR SER GLY GLN LYS LYS
SEQRES  31 A  710  ASP THR GLU ILE PHE TYR GLN PHE THR SER PHE LEU SER
SEQRES  32 A  710  PRO GLY ILE ILE TYR HIS CYS ASP LEU THR LYS GLU GLU
SEQRES  33 A  710  LEU GLU PRO ARG VAL PHE ARG GLU VAL THR VAL LYS GLY
SEQRES  34 A  710  ILE ASP ALA SER ASP TYR GLN THR VAL GLN ILE PHE TYR
SEQRES  35 A  710  PRO SER LYS ASP GLY THR LYS ILE PRO MET PHE ILE VAL
SEQRES  36 A  710  HIS LYS LYS GLY ILE LYS LEU ASP GLY SER HIS PRO ALA
SEQRES  37 A  710  PHE LEU TYR GLY PHE GLY GLY PHE ASN ILE SER ILE THR
SEQRES  38 A  710  PRO ASN TYR SER VAL SER ARG LEU ILE PHE VAL ARG HIS
SEQRES  39 A  710  MET GLY GLY VAL LEU ALA VAL ALA ASN ILE ARG GLY GLY
SEQRES  40 A  710  GLY GLU TYR GLY GLU THR TRP HIS LYS GLY GLY ILE LEU
SEQRES  41 A  710  ALA ASN LYS GLN ASN CYS PHE ASP ASP PHE GLN CYS ALA
SEQRES  42 A  710  ALA GLU TYR LEU ILE LYS GLU GLY TYR THR SER PRO LYS
SEQRES  43 A  710  ARG LEU THR ILE ASN GLY GLY SER ASN GLY GLY LEU LEU
SEQRES  44 A  710  VAL ALA THR CYS ALA ASN GLN ARG PRO ASP LEU PHE GLY
SEQRES  45 A  710  CYS VAL ILE ALA GLN VAL GLY VAL MET ASP MET LEU LYS
SEQRES  46 A  710  PHE HIS LYS TYR THR ILE GLY HIS ALA TRP THR THR ASP
SEQRES  47 A  710  TYR GLY CYS SER ASP SER LYS GLN HIS PHE GLU TRP LEU
SEQRES  48 A  710  ILE LYS TYR SER PRO LEU HIS ASN VAL LYS LEU PRO GLU
SEQRES  49 A  710  ALA ASP ASP ILE GLN TYR PRO SER MET LEU LEU LEU THR
SEQRES  50 A  710  ALA ASP HIS ASP ASP ARG VAL VAL PRO LEU HIS SER LEU
SEQRES  51 A  710  LYS PHE ILE ALA THR LEU GLN TYR ILE VAL GLY ARG SER
SEQRES  52 A  710  ARG LYS GLN ASN ASN PRO LEU LEU ILE HIS VAL ASP THR
SEQRES  53 A  710  LYS ALA GLY HIS GLY ALA GLY LYS PRO THR ALA LYS VAL
SEQRES  54 A  710  ILE GLU GLU VAL SER ASP MET PHE ALA PHE ILE ALA ARG
SEQRES  55 A  710  CYS LEU ASN ILE ASP TRP ILE PRO
HET    GOL  A 791       6
HET    GOL  A 792       6
HET    GOL  A 793       6
HET    GOL  A 794       6
HETNAM     GOL GLYCEROL
FORMUL   2  GOL    4(C3 H8 O3)
FORMUL   3  HOH   *1065(H2 O1)
HELIX    1   1 TYR A   28  ASP A   33  5                                   6
HELIX    2   2 SER A   36  GLN A   56  1                                  21
HELIX    3   3 PRO A   58  TYR A   71  1                                  14
HELIX    4   4 ASP A  115  SER A  120  5                                   6
HELIX    5   5 ASP A  218  ASP A  222  5                                   5
HELIX    6   6 GLN A  267  GLU A  269  5                                   3
HELIX    7   7 GLU A  322  TRP A  326  5                                   5
HELIX    8   8 ASP A  431  SER A  433  5                                   3
HELIX    9   9 SER A  485  GLY A  496  1                                  12
HELIX   10  10 TYR A  510  GLY A  517  1                                   8
HELIX   11  11 GLY A  518  ASN A  522  5                                   5
HELIX   12  12 LYS A  523  GLU A  540  1                                  18
HELIX   13  13 SER A  544  LYS A  546  5                                   3
HELIX   14  14 SER A  554  ARG A  567  1                                  14
HELIX   15  15 PRO A  568  PHE A  571  5                                   4
HELIX   16  16 LYS A  585  TYR A  589  5                                   5
HELIX   17  17 ILE A  591  ALA A  594  5                                   4
HELIX   18  18 TRP A  595  GLY A  600  1                                   6
HELIX   19  19 SER A  604  SER A  615  1                                  12
HELIX   20  20 PRO A  616  ASN A  619  5                                   4
HELIX   21  21 PRO A  646  VAL A  660  1                                  15
HELIX   22  22 PRO A  685  ASN A  705  1                                  21
SHEET    1  AA 2 ILE A  16  TYR A  19  0
SHEET    2  AA 2 HIS A  22  CYS A  25 -1  O  HIS A  22   N  TYR A  19
SHEET    1  AB 3 LYS A  75  TYR A  76  0
SHEET    2  AB 3 ARG A  85  ASN A  91 -1  O  ASN A  91   N  LYS A  75
SHEET    3  AB 3 PHE A  80  LYS A  82 -1  O  PHE A  80   N  PHE A  87
SHEET    1  AC 4 LYS A  75  TYR A  76  0
SHEET    2  AC 4 ARG A  85  ASN A  91 -1  O  ASN A  91   N  LYS A  75
SHEET    3  AC 4 VAL A  99  GLN A 103 -1  O  VAL A  99   N  TYR A  90
SHEET    4  AC 4 ARG A 111  LEU A 114 -1  O  ARG A 111   N  VAL A 102
SHEET    1  AD 4 VAL A 125  PHE A 132  0
SHEET    2  AD 4 TYR A 138  ALA A 145 -1  O  ALA A 140   N  ALA A 131
SHEET    3  AD 4 VAL A 151  LYS A 157 -1  O  THR A 152   N  LEU A 143
SHEET    4  AD 4 LYS A 162  VAL A 171 -1  O  LYS A 162   N  LYS A 157
SHEET    1  AE 4 MET A 176  TRP A 178  0
SHEET    2  AE 4 GLY A 184  ALA A 189 -1  O  PHE A 186   N  ALA A 177
SHEET    3  AE 4 LYS A 209  VAL A 214 -1  O  LYS A 209   N  ALA A 189
SHEET    4  AE 4 ILE A 223  ALA A 226 -1  O  ILE A 223   N  TYR A 212
SHEET    1  AF 4 MET A 235  LEU A 240  0
SHEET    2  AF 4 TYR A 246  ARG A 252 -1  O  LEU A 248   N  GLU A 239
SHEET    3  AF 4 ARG A 260  ASP A 265 -1  O  ARG A 260   N  ILE A 251
SHEET    4  AF 4 VAL A 280  ILE A 283 -1  O  VAL A 280   N  TYR A 263
SHEET    1  AG 4 TYR A 290  GLU A 296  0
SHEET    2  AG 4 VAL A 299  THR A 304 -1  O  VAL A 299   N  GLU A 296
SHEET    3  AG 4 ARG A 312  ASP A 317 -1  O  ARG A 312   N  THR A 304
SHEET    4  AG 4 LYS A 327  VAL A 330 -1  O  LYS A 327   N  ASN A 315
SHEET    1  AH 4 VAL A 337  VAL A 344  0
SHEET    2  AH 4 PHE A 348  HIS A 355 -1  O  PHE A 348   N  VAL A 344
SHEET    3  AH 4 LYS A 358  ASP A 365 -1  O  LYS A 358   N  HIS A 355
SHEET    4  AH 4 LEU A 371  PHE A 375 -1  N  LEU A 372   O  LEU A 363
SHEET    1  AI 4 SER A 381  SER A 386  0
SHEET    2  AI 4 GLU A 393  THR A 399 -1  O  PHE A 395   N  SER A 386
SHEET    3  AI 4 ILE A 406  ASP A 411 -1  O  ILE A 406   N  PHE A 398
SHEET    4  AI 4 PRO A 419  GLU A 424 -1  O  ARG A 420   N  HIS A 409
SHEET    1  AJ 8 TYR A 435  PRO A 443  0
SHEET    2  AJ 8 LYS A 449  LYS A 457 -1  O  ILE A 450   N  TYR A 442
SHEET    3  AJ 8 VAL A 498  ALA A 502 -1  O  LEU A 499   N  VAL A 455
SHEET    4  AJ 8 ALA A 468  TYR A 471  1  O  PHE A 469   N  ALA A 500
SHEET    5  AJ 8 LEU A 548  GLY A 553  1  O  THR A 549   N  LEU A 470
SHEET    6  AJ 8 CYS A 573  GLN A 577  1  O  CYS A 573   N  ILE A 550
SHEET    7  AJ 8 SER A 632  ALA A 638  1  O  SER A 632   N  VAL A 574
SHEET    8  AJ 8 LEU A 670  ASP A 675  1  O  LEU A 671   N  LEU A 635
SITE     1 AS1  3 SER A 554  ASP A 641  HIS A 680
SITE     1 AC1  8 ALA A 226  GLU A 227  PHE A 228  TRP A 262
SITE     2 AC1  8 ILE A 276  LYS A 281  HOH Z1058  HOH Z1059
SITE     1 AC2 11 PRO A 568  ASP A 569  PHE A 571  GLY A 572
SITE     2 AC2 11 ILE A 628  GLN A 629  PRO A 631  ASN A 668
SITE     3 AC2 11 HOH Z 972  HOH Z1060  HOH Z1061
SITE     1 AC3  5 ALA A 342  TYR A 385  HOH Z 723  HOH Z1062
SITE     2 AC3  5 HOH Z1063
SITE     1 AC4  7 PHE A 173  MET A 235  SER A 250  ARG A 252
SITE     2 AC4  7 HOH Z 394  HOH Z 471  HOH Z1065
CRYST1   71.200   99.800  111.100  90.00  90.00  90.00 P 21 21 21    4
ORIGX1      1.000000  0.000000  0.000000        0.00000
ORIGX2      0.000000  1.000000  0.000000        0.00000
ORIGX3      0.000000  0.000000  1.000000        0.00000
SCALE1      0.014045  0.000000  0.000000        0.00000
SCALE2      0.000000  0.010020  0.000000        0.00000
SCALE3      0.000000  0.000000  0.009001        0.00000
TER    5701      PRO A 710
MASTER      339    0    4   22   41    0   10    6 6789    1   24   55
END