Gene_Locus Report

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Gene_locus Report for: 9bifi-c0buf7

Bifidobacterium pseudocatenulatum DSM 20438 Putative uncharacterized protein

Relationship
Family|DPP4N_Peptidase_S9
Block| X
Position in NCBI Life Tree|Bifidobacterium pseudocatenulatum DSM 20438
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Actinobacteria [phylum]: N E > Actinobacteria [class]: N E > Bifidobacteriales: N E > Bifidobacteriaceae: N E > Bifidobacterium: N E > Bifidobacterium pseudocatenulatum: N E > Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : ABXX02000004
1 UniProt : C0BUF7
1 UniProt : C0BUF7
1 Interpro : C0BUF7
1 Pfam : C0BUF7
1 PIRSF : C0BUF7
1 SUPERFAM : C0BUF7
Sequence
Graphical view for this peptide sequence: 9bifi-c0buf7
Colored MSA for DPP4N_Peptidase_S9 (raw)
MIADGSRALFLRSDGPEDTVTSLWMSVIDEDGNIGEIPLADPRVLLADAD
AEDVPAEEKARRERAREGGSGIVSYCVDGAGNRVTFTINGQLFLTDLTAG
ATRAITIEEDELKPVLNPRISPDGRHIMYTTGTYLVDVDLANDEETGDAI
SVVASAPQNGEWKIGLAEFAAGEEMDRYDGFWWSPDSKYVLFETYDESPE
PIWHLSDPANPTNPAQANRYPQALTANADVRLTLLELGYDSDNCCYGAIA
NEVQWDHESYEYLAAVSWSEGHDPIILVQDRLQQHDQVLAIHVGEPIATM
RDAENGFTDDNGDEVETFSIAIPEYAEGERPGTTRVLEEHGNDYWLDLIH
GTPAFTPDGRLICAMNDMDVDTNRLTVDGTPFTPAGLQVREVLDVTDDDV
LCVVQRTPEILPESDLPFLWQSNASDHDARSFDVVSIRYDGTWEPLTYAP
GQWSMSRAGNGCVVTGRGMDDATVQMQHCMNIATTDENGTDVASMVVAPI
ENHAETPGFTPNVHFTRLGERELYTAIVLPSSDSEYAHEAILPVLMKPYG
GPGFQQVIESQSFYWDAQWWADQGYIVVTTDGRGTTGRGPQWDRAIYETM
KSVTLEDQIDAVRALPEALEALAGENAAANVPQPDLSRVAMIGWSYGGFL
SALAVLEAPETFAAACAGAPPTDWTLYDTHYTERYLGLDSAVYERNSIIA
DAPQLDRPLMLIHGFADDNVTIAHSLRLSQALMATGRKHTFLPLTGITHM
TNDETVAENLLILQRDFLAEALG
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MIADGSRALFLRSDGPEDTVTSLWMSVIDEDGNIGEIPLADPRVLLADAD
AEDVPAEEKARRERAREGGSGIVSYCVDGAGNRVTFTINGQLFLTDLTAG
ATRAITIEEDELKPVLNPRISPDGRHIMYTTGTYLVDVDLANDEETGDAI
SVVASAPQNGEWKIGLAEFAAGEEMDRYDGFWWSPDSKYVLFETYDESPE
PIWHLSDPANPTNPAQANRYPQALTANADVRLTLLELGYDSDNCCYGAIA
NEVQWDHESYEYLAAVSWSEGHDPIILVQDRLQQHDQVLAIHVGEPIATM
RDAENGFTDDNGDEVETFSIAIPEYAEGERPGTTRVLEEHGNDYWLDLIH
GTPAFTPDGRLICAMNDMDVDTNRLTVDGTPFTPAGLQVREVLDVTDDDV
LCVVQRTPEILPESDLPFLWQSNASDHDARSFDVVSIRYDGTWEPLTYAP
GQWSMSRAGNGCVVTGRGMDDATVQMQHCMNIATTDENGTDVASMVVAPI
ENHAETPGFTPNVHFTRLGERELYTAIVLPSSDSEYAHEAILPVLMKPYG
GPGFQQVIESQSFYWDAQWWADQGYIVVTTDGRGTTGRGPQWDRAIYETM
KSVTLEDQIDAVRALPEALEALAGENAAANVPQPDLSRVAMIGWSYGGFL
SALAVLEAPETFAAACAGAPPTDWTLYDTHYTERYLGLDSAVYERNSIIA
DAPQLDRPLMLIHGFADDNVTIAHSLRLSQALMATGRKHTFLPLTGITHM
TNDETVAENLLILQRDFLAEALG



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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