Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: 9sphn-a0a0c5lh13

Sphingomonas hengshuiensis. Carboxylic ester hydrolase

Relationship
Family|Carb_B_Bacteria
Block| C
Position in NCBI Life Tree|Sphingomonas hengshuiensis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Alphaproteobacteria: N E > Sphingomonadales: N E > Sphingomonadaceae: N E > Sphingomonas: N E > Sphingomonas hengshuiensis: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CP010836
Sequence
Graphical view for this peptide sequence: 9sphn-a0a0c5lh13
Colored MSA for Carb_B_Bacteria (raw)
MRDANMPQLGRRSVLTGAGAAAVATMMTDPATARPQAAPASNTTDAVRAG
VGIAEADTRSGKVAGYVRRGIFAFKGIPYADTTAGAHRFTPPRPAKPWDG
VRSCRNYGPVAPQDKGTGRFNDEEAFLFQWNDSVESEDCLRVNVWTPGIA
DGARRPVMVWLHGGGFAAGSGHDLPAFDGHNLAVRGDVVVVALNHRLNLL
GFLDLSAHGARYARSGNVGMLDIVAALEWVRDNIAAFGGDPGRVTIFGQS
GGGAKVSTLMGMPAARGLFHRAVVQSGSFASAKSVESQQRLAALMLAELG
IGAGELARLHALPYADLRRASEAVLRRENGGGIGPAAIGTRRFREALGFG
PVVDGSVLPAVPFGPDAPPVSADVPMIIGTTLNEFTTGINHPEVEAMTRA
ELLARVEAIYPGKAATIVAAFARRTPADKPFDLWSRIASAPVRQAAIAQA
QAKARAGGAPAYLYWFGWQTPVLDGRPRAFHCAEIPFVFDNVERCKTMTG
NGPRAHALAATIADAWIRFARTGDPNHPGMAAWSPYTAAAPATMVFDDSP
RQVVAIDRDELASLG
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MRDANMPQLGRRSVLTGAGAAAVATMMTDPATARPQAAPASNTTDAVRAG
VGIAEADTRSGKVAGYVRRGIFAFKGIPYADTTAGAHRFTPPRPAKPWDG
VRSCRNYGPVAPQDKGTGRFNDEEAFLFQWNDSVESEDCLRVNVWTPGIA
DGARRPVMVWLHGGGFAAGSGHDLPAFDGHNLAVRGDVVVVALNHRLNLL
GFLDLSAHGARYARSGNVGMLDIVAALEWVRDNIAAFGGDPGRVTIFGQS
GGGAKVSTLMGMPAARGLFHRAVVQSGSFASAKSVESQQRLAALMLAELG
IGAGELARLHALPYADLRRASEAVLRRENGGGIGPAAIGTRRFREALGFG
PVVDGSVLPAVPFGPDAPPVSADVPMIIGTTLNEFTTGINHPEVEAMTRA
ELLARVEAIYPGKAATIVAAFARRTPADKPFDLWSRIASAPVRQAAIAQA
QAKARAGGAPAYLYWFGWQTPVLDGRPRAFHCAEIPFVFDNVERCKTMTG
NGPRAHALAATIADAWIRFARTGDPNHPGMAAWSPYTAAAPATMVFDDSP
RQVVAIDRDELASLG



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer