Gene_Locus Report

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Gene_locus Report for: 9sphn-a0a0q4q0u1

Sphingomonas sp. Type IV secretion system protein VirJ

Comment
Other strains: Sphingomonas sp. Leaf67


Relationship
Family|VirJ
Block| X
Position in NCBI Life Tree|Sphingomonas sp. Leaf67
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Alphaproteobacteria: N E > Sphingomonadales: N E > Sphingomonadaceae: N E > Sphingomonas: N E > Sphingomonas sp. Leaf67: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: 9sphn-a0a0q4q0u1
Colored MSA for VirJ (raw)
MSLSPLARRTRLRRRIGIGALLAGLLVLLGLAAPALHLIDTQSIRFFQGK
KHPDVVAVYFSGDMGLRFGMGSKVVPALAAHGIPVIGVSSPVNFGTTRSR
EQADAIVVGAIRTALAQTGAHRVILMGQSFGADIVSAIAPDLPADLRAKV
AAINVVVPAQTVFFRSDPTGILYHGTPDAHPEAAMRALHWAPVICIYGTD
ETESLCPTLRGSGAQVVGLPGGHFLRNDDQLLVATILATLRTADPSILT
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSLSPLARRTRLRRRIGIGALLAGLLVLLGLAAPALHLIDTQSIRFFQGK
KHPDVVAVYFSGDMGLRFGMGSKVVPALAAHGIPVIGVSSPVNFGTTRSR
EQADAIVVGAIRTALAQTGAHRVILMGQSFGADIVSAIAPDLPADLRAKV
AAINVVVPAQTVFFRSDPTGILYHGTPDAHPEAAMRALHWAPVICIYGTD
ETESLCPTLRGSGAQVVGLPGGHFLRNDDQLLVATILATLRTADPSILT



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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Acknowledgements and disclaimer