Gene_Locus Report

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Gene_locus Report for: citcl-v4t568

Citrus clementina (Clementine) (Citrus deliciosa x Citrus sinensis). AB hydrolase-1 domain-containing protein

Relationship
Family|Auxin-response-4
Block| X
Position in NCBI Life Tree|Citrus clementina
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > eudicotyledons: N E > Gunneridae: N E > Pentapetalae: N E > rosids: N E > malvids: N E > Sapindales: N E > Rutaceae: N E > Aurantioideae: N E > Citrus: N E > Citrus clementina: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : KI536799, XP_006433335
1 UniProt : V4T568
1 UniProt : V4T568
1 Interpro : V4T568
1 Pfam : V4T568
1 PIRSF : V4T568
1 SUPERFAM : V4T568
Sequence
Graphical view for this peptide sequence: citcl-v4t568
Colored MSA for Auxin-response-4 (raw)
MPIITEEPEQEPQLQNQRHQEEQPKQKQISQTKEPQQHTNPFLFWCYLVL
FVSLITLLFISFTPQDNNPRSWFLSLDSSLRHHYSNGRIIKVQTSPNQSP
IELFTFQNGIDSTENVFIIHGLGLSSFAFREMINSLRSKKFNVIAVDLPG
NGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYE
EILKARVLERKSVKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPM
SANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQWL
IRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSE
GIKGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGHSGGRWPQVDSAD
ELAKHIADFVSSLPKTVRQVEEEPIPEHIQKMFDEASSSGHNHDHHHSHS
GHDNHEGHAHAAGYMDAYGLGHTWGQ
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPIITEEPEQEPQLQNQRHQEEQPKQKQISQTKEPQQHTNPFLFWCYLVL
FVSLITLLFISFTPQDNNPRSWFLSLDSSLRHHYSNGRIIKVQTSPNQSP
IELFTFQNGIDSTENVFIIHGLGLSSFAFREMINSLRSKKFNVIAVDLPG
NGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYE
EILKARVLERKSVKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPM
SANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQWL
IRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSE
GIKGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGHSGGRWPQVDSAD
ELAKHIADFVSSLPKTVRQVEEEPIPEHIQKMFDEASSSGHNHDHHHSHS
GHDNHEGHAHAAGYMDAYGLGHTWGQ



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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