Gene_Locus Report

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Gene_locus Report for: gosba-a0a2p5rpl7

Gossypium barbadense (Sea-island cotton) (Egyptian cotton). Uncharacterized protein

Relationship
Family|UCP031088
Block| X
Position in NCBI Life Tree|Gossypium barbadense
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > eudicotyledons: N E > Gunneridae: N E > Pentapetalae: N E > rosids: N E > malvids: N E > Malvales: N E > Malvaceae: N E > Malvoideae: N E > Gossypium: N E > Gossypium barbadense: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : KZ647638
Sequence
Graphical view for this peptide sequence: gosba-a0a2p5rpl7
Colored MSA for UCP031088 (raw)
MLRKAEKDCFRPRRNFTLPRRFRPRPPSLHSHSSTSLRPLPRAFSNDPAV
TEKPSICTADELHYVPLPNSDWRLALWRYHPPPQALPRNHPLLLLSGLGT
NAIGYDLSPEVLCCMMLFSCVCSWIDQDLHLRDTCHGQGFDTWILEFRGA
GLSVQASNLKELKQSADAVSEQIEAIAKSVANEVSPQKQPTGVSGYLSDS
EFYFLREDSIGIGTAWDEAKLVAELTEIFMRLSERLSGFLSESQSRLIST
KLLDQISKLLEDSQLSERFEEVRIKLANVLEKQQNSVIASQIRDLSQRLV
NIIEGGQRSVSPQFIDIQERLSSTIEDFQKQLDLIVKYDWDFDHYLEEDV
PAAMEYIRAQTKPKDGKLLAIGHSMGGILLYAMLSRCVELHFENPIGGNV
VAELCHCITTATILDSSSEGREPRLKAVVTMASALDYRCSKPLKVLLPLA
DPAQALNVPAVPFGTLLAAAYPLASRPPYVLGWLNDLISAEDMMHPELLE
KLVLNNFCTIPTKLIMQLTSAFGDKGLCNRSGKLSYRDHLNKSNVPVLAI
AGDQDLICPPEAVEETAKLFPENLVTYKLFGEPHGPHYAHYDLVGGRLAM
EQVYPCIVQFLSQYD
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MLRKAEKDCFRPRRNFTLPRRFRPRPPSLHSHSSTSLRPLPRAFSNDPAV
TEKPSICTADELHYVPLPNSDWRLALWRYHPPPQALPRNHPLLLLSGLGT
NAIGYDLSPEVLCCMMLFSCVCSWIDQDLHLRDTCHGQGFDTWILEFRGA
GLSVQASNLKELKQSADAVSEQIEAIAKSVANEVSPQKQPTGVSGYLSDS
EFYFLREDSIGIGTAWDEAKLVAELTEIFMRLSERLSGFLSESQSRLIST
KLLDQISKLLEDSQLSERFEEVRIKLANVLEKQQNSVIASQIRDLSQRLV
NIIEGGQRSVSPQFIDIQERLSSTIEDFQKQLDLIVKYDWDFDHYLEEDV
PAAMEYIRAQTKPKDGKLLAIGHSMGGILLYAMLSRCVELHFENPIGGNV
VAELCHCITTATILDSSSEGREPRLKAVVTMASALDYRCSKPLKVLLPLA
DPAQALNVPAVPFGTLLAAAYPLASRPPYVLGWLNDLISAEDMMHPELLE
KLVLNNFCTIPTKLIMQLTSAFGDKGLCNRSGKLSYRDHLNKSNVPVLAI
AGDQDLICPPEAVEETAKLFPENLVTYKLFGEPHGPHYAHYDLVGGRLAM
EQVYPCIVQFLSQYD



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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