Title : Analysis of 94 kb of the chlorella virus PBCV-1 330-kb genome: map positions 88 to 182 - Lu_1996_Virology_216_102 |
Author(s) : Lu Z , Li Y , Que Q , Kutish GF , Rock DL , Van Etten JL |
Ref : Virology , 216 :102 , 1996 |
Abstract :
Analysis of 94 kb of DNA, located between map positions 88 and 182 kb in the 330-kb chlorella virus PBCV-1 genome, revealed 195 open reading frames (ORFs) 65 codons or longer. One hundred and five of the 195 ORFs were considered major ORFs. Twenty-six of the 105 major ORFs resembled genes in the databases including three chitinases, a chitosanase, three serine/threonine protein kinases, two additional protein kinases, a tyrosine protein phosphatase, two ankyrins, an ornithine decarboxylase, a copper/zinc-superoxide dismutase, a proliferating cell nuclear antigen, a DNA polymerase, a fibronectin-binding protein, the yeast Ski2 protein, an adenine DNA methyltransferase and its corresponding DNA site-specific endonuclease, and an amidase. The genes for the 105 major ORFs were evenly distributed along the genome and, except for one noncoding 1788-nucleotide stretch, the genes were close together. Unexpectedly, a 900-bp region in the 1788-bp noncoding sequence resembled a CpG island. |
PubMedSearch : Lu_1996_Virology_216_102 |
PubMedID: 8614977 |
Gene_locus related to this paper: pbcva-a7rbb8 |
Gene_locus | pbcva-a7rbb8 |
Lu Z, Li Y, Que Q, Kutish GF, Rock DL, Van Etten JL (1996)
Analysis of 94 kb of the chlorella virus PBCV-1 330-kb genome: map positions 88 to 182
Virology
216 :102
Lu Z, Li Y, Que Q, Kutish GF, Rock DL, Van Etten JL (1996)
Virology
216 :102