Title : Complete genome sequencing and analysis of Saprospira grandis str. Lewin, a predatory marine bacterium - Saw_2012_Stand.Genomic.Sci_6_84 |
Author(s) : Saw JH , Yuryev A , Kanbe M , Hou S , Young AG , Aizawa S , Alam M |
Ref : Stand Genomic Sci , 6 :84 , 2012 |
Abstract :
Saprospira grandis is a coastal marine bacterium that can capture and prey upon other marine bacteria using a mechanism known as 'ixotrophy'. Here, we present the complete genome sequence of Saprospira grandis str. Lewin isolated from La Jolla beach in San Diego, California. The complete genome sequence comprises a chromosome of 4.35 Mbp and a plasmid of 54.9 Kbp. Genome analysis revealed incomplete pathways for the biosynthesis of nine essential amino acids but presence of a large number of peptidases. The genome encodes multiple copies of sensor globin-coupled rsbR genes thought to be essential for stress response and the presence of such sensor globins in Bacteroidetes is unprecedented. A total of 429 spacer sequences within the three CRISPR repeat regions were identified in the genome and this number is the largest among all the Bacteroidetes sequenced to date. |
PubMedSearch : Saw_2012_Stand.Genomic.Sci_6_84 |
PubMedID: 22675601 |
Gene_locus related to this paper: sapgl-h6kz52 , sapgl-h6l1q6 |
Gene_locus | sapgl-h6kz52 sapgl-h6l1q6 |
Saw JH, Yuryev A, Kanbe M, Hou S, Young AG, Aizawa S, Alam M (2012)
Complete genome sequencing and analysis of Saprospira grandis str. Lewin, a predatory marine bacterium
Stand Genomic Sci
6 :84
Saw JH, Yuryev A, Kanbe M, Hou S, Young AG, Aizawa S, Alam M (2012)
Stand Genomic Sci
6 :84