Title : Genome update of Botrytis cinerea strains B05.10 and T4 - Staats_2012_Eukaryot.Cell_11_1413 |
Author(s) : Staats M , van Kan JA |
Ref : Eukaryot Cell , 11 :1413 , 2012 |
Abstract :
We report here an update of the Botrytis cinerea strains B05.10 and T4 genomes, as well as an automated preliminary gene structure annotation. High-coverage de novo assemblies and reference-based alignments led to a correction of wrong base calls, elimination of sequence gaps, and improved joining of contigs. The new assemblies have substantially lower numbers of scaffolds and a concomitant increase in the N(50).The list of protein-coding genes was generated using the evidence-driven gene predictor Augustus, with expressed sequence tag evidence and RNA-Seq data as input. |
PubMedSearch : Staats_2012_Eukaryot.Cell_11_1413 |
PubMedID: 23104368 |
Gene_locus related to this paper: botf4-g2y3y4 |
Gene_locus | botf4-g2y3y4 |
Staats M, van Kan JA (2012)
Genome update of Botrytis cinerea strains B05.10 and T4
Eukaryot Cell
11 :1413
Staats M, van Kan JA (2012)
Eukaryot Cell
11 :1413