Yadav_2023_Chemistry__e202300244

Reference

Title : Esterase specific Fluorescent Probe: Mechanistic Understanding Using QM\/MM Calculation and Cell States Discrimination - Yadav_2023_Chemistry__e202300244
Author(s) : Yadav R , Munan S , Kardam V , Dubey KD , Samanta A
Ref : Chemistry , :e202300244 , 2023
Abstract :

Esterases enzymes regulate the body's homeostasis by catalyzing the hydrolysis of various esters. These are also involved in protein metabolism, detoxification, and signal transmission. Most importantly, esterase plays a significant role in cell viability and cytotoxicity assays. Hence, developing an efficient chemical probe is essential for monitoring the esterase activity. Several fluorescent probes for esterase have also been reported targeting cytosol and lysosomes. However, the ability to create efficient probes is constrained due to a lack of understanding of the esterase's active site for hydrolyzing the substrate. In addition, the fluorescent turn-on may limit efficient monitoring. Herein, we have developed a unique fluorescent probe, PM-OAc, to monitor mitochondrial esterase enzyme activity ratiometrically. This probe exhibited a bathochromic wavelength shift with esterase enzyme in alkaline pH (pH~ 8.0) due to an intramolecular charge transfer (ICT) process. The phenomenon is well supported by TD-DFT calculation. Moreover, the substrate (PM-OAc) binding at the active site of esterase and its catalytic mechanism to hydrolyze the ester bond are elucidated by molecular dynamics (MD) simulation and QM/MM (Quantum mechanics/molecular mechanics) calculations, respectively. Fluorescent image-based analysis of the cellular environment reveals that our probe can distinguish between live and dead cells based on esterase enzyme activity.

PubMedSearch : Yadav_2023_Chemistry__e202300244
PubMedID: 37014630

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Citations formats

Yadav R, Munan S, Kardam V, Dubey KD, Samanta A (2023)
Esterase specific Fluorescent Probe: Mechanistic Understanding Using QM\/MM Calculation and Cell States Discrimination
Chemistry :e202300244

Yadav R, Munan S, Kardam V, Dubey KD, Samanta A (2023)
Chemistry :e202300244