BPSS1187-like
Relationship
Comment
BPSS1187 from Burkholderia pseudomallei (Q63L22) was identified as a type III secretion system (T3SS) protein and a useful marker for detecting Burkholderia pseudomallei and discriminating it from multiple other Burkholderia species. Used in the diagnosis of melioidosis. Members of this family occur in genera widely separated taxonomically, including Leptospira (Spirochaetia), Rhodopirellula (Flavobacteriales), Gloeobacter (Cyanobacteriota), Mesorhizobium (Alphaproteobacteria), and Polyangium (Myxococcota)
Database
Interpro : IPR058180 BPSS1187-like
PIRSF : No PIRSF
Pdoc : No Pdoc
Pfam : No Pfam
Prints : No Print
EC Number : No EC Number
Sequences
| Peptide in | Fasta |
| Nucleotide in | Fasta |
| Alignment with Multalin | Text only |
| Seed alignment with MAFFT | No colour / coloured with Mview |
| Alignment with MAFFT | No colour / coloured with Mview |
| Dendrogram | The dnd file |
| Gene_locus | Name | Species |
|---|---|---|
| 9bact-a0a1h3zbt8 | Chitinophaga terrae (ex Kim and Jung 2007). Alpha\/beta hydrolase | Chitinophaga terrae |
| 9bact-a0a1i0rlu3 | Chitinophaga arvensicola. Alpha\/beta hydrolase family protein | Chitinophaga arvensicola |
| 9bact-a0a1i2e369 | Nannocystis exedens. Alpha\/beta hydrolase family protein | Nannocystis exedens |
| 9bact-a0a1t4y5u6 | Prosthecobacter debontii. Uncharacterized protein | Prosthecobacter debontii |
| 9bact-a0a1t4yu76 | Prosthecobacter debontii. Alpha\/beta hydrolase family protein | Prosthecobacter debontii |
| 9bact-a0a3e1nnm3 | Deminuibacter soli. Alpha\/beta hydrolase | Deminuibacter soli |
| 9bact-a0a3n4pw67 | Chitinophaga lutea. Alpha\/beta hydrolase | Chitinophaga lutea |
| 9bact-a0a517p074 | Stieleria marina. Alpha\/beta hydrolase family protein | Stieleria marina |
| 9bact-a0a517t2b5 | Stieleria bergensis. Alpha\/beta hydrolase family protein | Stieleria bergensis |
| 9bact-a0a517ymq9 | Anatilimnocola aggregata. Alpha\/beta hydrolase | Anatilimnocola aggregata |
| 9bact-a0a518jy96 | Rosistilla carotiformis. Alpha\/beta hydrolase family protein | Rosistilla carotiformis |
| 9bact-a0a5b8v5w9 | Panacibacter ginsenosidivorans. Alpha\/beta hydrolase | Panacibacter ginsenosidivorans |
| 9bact-a0a5b9m8t2 | Stieleria maiorica. Alpha\/beta hydrolase family protein | Stieleria maiorica |
| 9bact-a0a5c5xvj9 | Allorhodopirellula solitaria. Alpha\/beta hydrolase family protein | Allorhodopirellula solitaria |
| 9bact-a0a6c2yn30 | Tuwongella immobilis. Alpha\/beta hydrolase | Tuwongella immobilis |
| 9bact-a0a858rs12 | Luteolibacter luteus. Alpha\/beta hydrolase | Luteolibacter luteus |
| 9bact-a0a934r637 | Luteolibacter yonseiensis. Alpha\/beta hydrolase | Luteolibacter yonseiensis |
| 9bact-a0aap2gig6 | Chryseosolibacter histidini. Alpha\/beta hydrolase | Chryseosolibacter histidini |
| 9bact-a0abw0kpf0 | Prosthecobacter fluviatilis. BPSS1187 family protein | Prosthecobacter fluviatilis |
| 9bact-a0abw1z9a1 | Granulicella cerasi. BPSS1187 family protein | Granulicella cerasi |
| 9bact-a0abw2l5n2 | Haloferula chungangensis. BPSS1187 family protein | Haloferula chungangensis |
| 9bact-a0abw5ddp0 | Luteolibacter algae. BPSS1187 family protein | Luteolibacter algae |
| 9bact-m5s191 | Rhodopirellula maiorica SM1. Uncharacterized protein | Rhodopirellula maiorica SM1 |
| 9burk-a0a1i3efd4 | Paraburkholderia megapolitana. Uncharacterized protein | Paraburkholderia megapolitana |
| 9flao-a0a3d9d9i9 | Chryseobacterium elymi. Alpha\/beta hydrolase | Chryseobacterium elymi |
| 9flao-a0a967atb0 | Pelagihabitans pacificus. Alpha\/beta hydrolase family protein | Pelagihabitans pacificus |
| 9flao-a0a9x1l0y4 | Neotamlana laminarinivorans. Alpha\/beta hydrolase family protein | Neotamlana laminarinivorans |
| 9gamm-a0a1b4v770 | Sulfurifustis variabilis. Alpha\/beta hydrolase | Sulfurifustis variabilis |
| 9gamm-a0a970b4q6 | Solimonas marina. Alpha\/beta hydrolase family protein | Solimonas marina |
| 9gamm-h8yzw8 | Thiorhodovibrio frisius. Uncharacterized protein | Thiorhodovibrio frisius |
| 9lept-a0a1d7uzx5 | Leptospira tipperaryensis. Alpha\/beta hydrolase | Leptospira tipperaryensis |
| 9lept-a0aad0um11 | Leptospira kmetyi. Alpha\/beta hydrolase | Leptospira kmetyi |
| 9lept-a0aae4tyx0 | Leptospira ellisii. Alpha\/beta hydrolase | Leptospira ellisii |
| 9lept-a0aaw5vnh2 | Leptospira soteropolitanensis. Alpha\/beta hydrolase | Leptospira soteropolitanensis |
| 9mico-a0a495ikp4 | Frondihabitans australicus. Alpha\/beta hydrolase family protein | Frondihabitans australicus |
| 9mico-a0a5b8m0k2 | Humibacter ginsenosidimutans. Alpha\/beta hydrolase | Humibacter ginsenosidimutans |
| 9mico-a0a8h9g712 | Curtobacterium luteum. Alpha\/beta hydrolase | Curtobacterium luteum |
| 9mico-a0a934w2l7 | Lacisediminihabitans changchengi. Alpha\/beta hydrolase | Lacisediminihabitans changchengi |
| 9mico-a0a934w3m3 | Lacisediminihabitans changchengi. Alpha\/beta fold hydrolase | Lacisediminihabitans changchengi |
| 9neis-a0aad0wa76 | Chromobacterium rhizoryzae. Alpha\/beta hydrolase | Chromobacterium rhizoryzae |
| 9plan-a0a517qeb4 | Gimesia panareensis. Uncharacterized protein | Gimesia panareensis |
| 9plan-a0a517sls5 | Caulifigura coniformis. Alpha\/beta hydrolase family protein | Caulifigura coniformis |
| 9plan-a0a517tex1 | Calycomorphotria hydatis. Alpha\/beta hydrolase family protein | Calycomorphotria hydatis |
| 9plan-a0a518gjx0 | Planctopirus ephydatiae. Alpha\/beta hydrolase family protein | Planctopirus ephydatiae |
| 9prot-a0a1u9krh2 | Neoasaia chiangmaiensis. Uncharacterized protein | Neoasaia chiangmaiensis |
| 9sphn-a0a7x5zvq3 | Sphingomonas leidyi. Alpha\/beta hydrolase | Sphingomonas leidyi |
| 9zzzz-a0a3b1dxm8 | hydrothermal vent metagenome. Uncharacterized protein | hydrothermal vent metagenome |
| burps-q63l22 | Burkholderia pseudomallei (strain K96243). Alpha\/beta hydrolase | Burkholderia pseudomallei |
| glovi-q7nmw8 | Gloeobacter violaceus (strain ATCC 29082 \/ PCC 7421). Gll0647 protein | Gloeobacter violaceus |
| lepbp-b0sn03 | Leptospira biflexa serovar Patoc (strain Patoc 1 \/ ATCC 23582 \/ Paris). Uncharacterized protein | Leptospira biflexa serovar Patoc |
| sorc5-a9gm70 | Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain So ce56)). Uncharacterized protein | Sorangium cellulosum |
| sorce-a0a4p2r203 | Sorangium cellulosum (Polyangium cellulosum). Secreted protein | Sorangium cellulosum |
References (1)
| Title : Highly sensitive direct detection and quantification of Burkholderia pseudomallei bacteria in environmental soil samples by using real-time PCR - Trung_2011_Appl.Environ.Microbiol_77_6486 |
| Author(s) : Trung TT , Hetzer A , Gohler A , Topfstedt E , Wuthiekanun V , Limmathurotsakul D , Peacock SJ , Steinmetz I |
| Ref : Applied Environmental Microbiology , 77 :6486 , 2011 |
| Abstract : |
| PubMedSearch : Trung_2011_Appl.Environ.Microbiol_77_6486 |
| PubMedID: 21803915 |
| Gene_locus related to this paper: burps-q63l22 |