Bacterial_lip_FamI.8
Relationship
Comment
This family correspond to family I.8 of the classification of Arpigny and Jaeger (1999). These lipases differ from other bacterial lipases but groups putative psychrophilic esterases/lipases. The closest family is CarbLipBact_2. Features of the new family include: a conserved new active-site pentapeptide motif (LGG(F/L/Y)STG); the likely extra-cytoplasmic localization; the absence of a typical calcium-binding pocket; and the absence of a canonical lid.
Database
Interpro : No interpro
PIRSF : No PIRSF
Pdoc : No Pdoc
Pfam : PF12146 Hydrolase_4
Prints : No Print
EC Number : No EC Number
Sequences
| Peptide in | Fasta |
| Nucleotide in | Fasta |
| Alignment with Multalin | Text only |
| Seed alignment with MAFFT | No colour / coloured with Mview |
| Alignment with MAFFT | No colour / coloured with Mview |
| Dendrogram | The dnd file |
| Gene_locus | Name | Species |
|---|---|---|
| pseht-q3if07 | Pseudoalteromonas haloplanktis (strain TAC 125)\; Pseudoalteromonas nigrifaciens\; cold-active Lip1 lipase PhTAC125 from Antarctic bacterium | Pseudoalteromonas haloplanktis TAC125 |
| 9zzzz-a0a0g3fh31 | uncultured organism EH131 Uncharacterized protein | uncultured organism |
| altat-q3ctb9 | Pseudoalteromonas atlantica T6c hypothetical protein precursor | Pseudoalteromonas atlantica T6c |
| erwct-q6d884 | Erwinia carotovora (subsp. atroseptica) (Pectobacterium atrosepticum) putative lipoprotein | Erwinia carotovora |
| hahch-q2sgz8 | Hahella chejuensis (strain KCTC 2396) putative esterase\/lipase | Hahella chejuensis |
| psesy-PSPTO3282 | Pseudomonas syringae (multiple patovars) lipoprotein, putative | Pseudomonas syringae |
| sheon-SO2024 | Shewanella oneidensis hypothetical protein | Shewanella oneidensis |
| yerpe-YPO4014 | Yersinia pestis putative membrane protein (hypothetical) | Yersinia pestis |
| 9gamm-a0a0u2irj7 | Pseudoalteromonas translucida KMM 520 Uncharacterized protein | Pseudoalteromonas translucida KMM 520 |
| 9gamm-g7ej95 | Pseudoalteromonas sp\; Pseudoalteromonas aliena\; Pseudoalteromonas flavipulchra\; Pseudoalteromonas haloplanktis Pseudoalteromonas fuliginea\; Pseudoalteromonas arctica. Uncharacterized protein | Pseudoalteromonas sp. |
| 9gamm-a0a0w1kws0 | Pseudoalteromonas sp.\; Pseudoalteromonas carrageenovora Esterase | Pseudoalteromonas sp. |
| 9gamm-a0a0n1mpv6 | Pseudoalteromonas porphyrae Esterase | Pseudoalteromonas porphyrae |
| 9gamm-a0a1y5js49 | Pseudoalteromonas sp. Esterase | Pseudoalteromonas sp. |
| 9gamm-a0a2g1b2n8 | Pseudoalteromonas sp. Esterase | Pseudoalteromonas sp. |
| pseas-a0a2d5l0u5 | Pseudoalteromonas sp.\; Pseudoalteromonadaceae bacterium\; Halomonas sp.\; Pseudoalteromonas lipolytica\; Pseudoalteromonas profundi\; Pseudoalteromonas shioyasakiensis Esterase | Pseudoalteromonas sp. |
| 9gamm-a0a0f4pw61 | Pseudoalteromonas ruthenica\; Pseudoalteromonas sp. Uncharacterized protein | Pseudoalteromonas ruthenica |
| 9gamm-a0a396u5y8 | Colwellia sp. Alpha\/beta fold hydrolase | Colwellia sp. |
| colps-a0a099l3w2 | Colwellia psychrerythraea (Vibrio psychroerythus)\; Colwellia marinimaniae\; Colwellia sp. Uncharacterized protein | Colwellia psychrerythraea |
| colp3-q48an1 | Colwellia psychrerythraea (Vibrio psychroerythus)\; Colwellia sp. Uncharacterized protein | Colwellia psychrerythraea |
| 9gamm-a0a1s1ncu9 | Pseudoalteromonas byunsanensis Uncharacterized protein | Pseudoalteromonas byunsanensis |
| 9gamm-a0a1s1mzk0 | Pseudoalteromonas amylolytica Uncharacterized protein | Pseudoalteromonas amylolytica |
| 9gamm-a4cf12 | Pseudoalteromonas tunicata Uncharacterized protein | Pseudoalteromonas tunicata |
| 9gamm-a0a244cnr9 | Pseudoalteromonas ulvae Lysophospholipase | Pseudoalteromonas ulvae |
| 9gamm-a0a0d8cu42 | Thalassomonas actiniarum Lysophospholipase | Thalassomonas actiniarum |
| 9gamm-a0a0d8dc66 | Thalassomonas viridans Uncharacterized protein | Thalassomonas viridans |
| agaal-r9pmi2 | Agarivorans albus MKT 106 Lysophospholipase \; EC=3.1.1.5 | Agarivorans albus MKT 106 |
| 9gamm-l8d6w3 | Pseudoalteromonas luteoviolacea B = ATCC 29581 Lysophospholipase \; EC=3.1.1.5 | Pseudoalteromonas luteoviolacea B = ATCC 29581 |
| 9gamm-a0a0a7edv1 | Pseudoalteromonas piratica Uncharacterized protein | Pseudoalteromonas piratica |
| 9gamm-a0a2n0wut7 | Alteromonadales bacterium alter-6D02 Lysophospholipase | Alteromonadales bacterium alter-6D02 |
| pseas-a0a2d5sxx5 | Pseudoalteromonas sp.\; Pseudoalteromonas phenolica Lysophospholipase | Pseudoalteromonas sp. |
| 9gamm-a0a1q6clz2 | Thalassotalea sp. Uncharacterized protein | Thalassotalea sp. |
| pseo7-a0a290tvy8 | Pseudoalteromonas piscicida\; Pseudoalteromonas sp. Uncharacterized protein | Pseudoalteromonas piscicida |
| 9gamm-u1j8w4 | Pseudoalteromonas citrea\; Pseudoalteromonas sp. Uncharacterized protein | Pseudoalteromonas citrea DSM 8771 |
| 9gamm-a0a0p9hkn1 | Pseudoalteromonas sp.\; Pseudoalteromonas spongiae Thermostable monoacylglycerol lipase \; EC=3.1.1.23 | Pseudoalteromonas sp. |
| 9gamm-a0a161zzs9 | Pseudoalteromonas luteoviolacea DSM 6061 Uncharacterized protein | Pseudoalteromonas luteoviolacea DSM 6061 |
| 9gamm-u1ksd4 | Pseudoalteromonas rubra Esterase | Pseudoalteromonas rubra |
| 9gamm-a0a1c0tkt4 | Pseudoalteromonas luteoviolacea Uncharacterized protein | Pseudoalteromonas luteoviolacea |
| 9gamm-a0a269pri5 | Pseudoalteromonas sp. Uncharacterized protein | Pseudoalteromonas sp. |
| 9gamm-v4jeu8 | Pseudoalteromonas luteoviolacea Esterase\/lipase | Pseudoalteromonas luteoviolacea |
| 9gamm-a0a1i1qir6 | Pseudoalteromonas denitrificans DSM 6059 Esterase\/lipase | Pseudoalteromonas denitrificans DSM 6059 |
| 9gamm-a0a368zv11 | Marinomonas foliarum Esterase\/lipase | Marinomonas foliarum |
| 9gamm-a0a370u5b1 | Marinomonas sp. Carboxylesterase | Marinomonas sp. |
| 9gamm-a0a1c3jtc4 | Marinomonas gallaica Thermostable monoacylglycerol lipase \; EC=3.1.1.23 | Marinomonas gallaica |
| desah-c0q957 | Desulfobacterium autotrophicum (strain ATCC 43914 \/ DSM 3382 \/ HRM2) Uncharacterized protein | Desulfobacterium autotrophicum |
| 9gamm-a0a1a8t9a9 | Marinomonas aquimarina Thermostable monoacylglycerol lipase \; EC=3.1.1.23 | Marinomonas aquimarina |
| 9gamm-a0a318uvt1 | Marinomonas alcarazii Esterase\/lipase | Marinomonas alcarazii |
| 9gamm-a0a2d6dhn9 | Marinomonas sp Carboxylesterase | Marinomonas sp. |
| 9gamm-a0a0k6il60 | Marinomonas fungiae Esterase\/lipase | Marinomonas fungiae |
| marms-a6w3a9 | Marinomonas sp.\; Marinomonas polaris\; Marinomonas rhizomae Carboxylesterase | Marinomonas sp. |
| 9gamm-a0a0f4qme2 | Marinomonas sp. Uncharacterized protein | Marinomonas sp. |
| 9prot-a0a2x0qt22 | Candidatus Nitrotoga Uncharacterized protein | Candidatus Nitrotoga |
| 9prot-a0a139bnr5 | Candidatus Gallionella acididurans Uncharacterized protein | Candidatus Gallionella acididurans |
| 9gamm-a0a3e0di61 | Marinomonas pollencensis Esterase\/lipase | Marinomonas pollencensis |
| 9prot-a0a1g0d651 | Gallionellales bacterium Uncharacterized protein | Gallionellales bacterium RIFCSPLOWO2_02_FULL_57_47 |
| 9prot-a0a1g0buy5 | Gallionellales bacterium Uncharacterized protein | Gallionellales bacterium GWA2_55_18 |
| 9gamm-a3yhv1 | Marinomonas sp. Lipoprotein, putative | Marinomonas sp. |
| marpp-f6cui1 | Marinomonas posidonica\; Marinomonas aquiplantarum\; Marinomonas sp. Uncharacterized protein | Marinomonas posidonica |
| 9prot-a0a3d2fdi9 | Gallionellaceae bacterium\; Gallionellaceae bacterium Uncharacterized protein | Gallionellaceae bacterium |
| 9prot-a0a3e1d7e3 | Candidatus Nitrotoga sp. Esterase\/lipase | Candidatus Nitrotoga sp. |
| 9gamm-a0a0f4qpe2 | Marinomonas sp. Uncharacterized protein | Marinomonas sp. |
| 9gamm-a0a2e3mh72 | Legionellales bacterium Uncharacterized protein | Legionellales bacterium |
| 9delt-a0a2n2jsl4 | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-11 Uncharacterized protein | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-11 |
| 9gamm-a0a351sgf4 | Gammaproteobacteria bacterium Uncharacterized protein | Gammaproteobacteria bacterium |
| 9prot-a0a1g0dj97 | Gallionellales bacterium Uncharacterized protein | Gallionellales bacterium 24-53-125 |
| 9gamm-x7e268 | Marinomonas ushuaiensis DSM 15871 Carboxylesterase | Marinomonas ushuaiensis DSM 15871 |
| 9prot-a0a2s5kp67 | Proteobacteria bacterium\; Pokkaliibacter plantistimulans Uncharacterized protein | Proteobacteria bacterium |
| 9gamm-a3yhv0 | Marinomonas sp. Lipoprotein, putative | Marinomonas sp. |
| 9gamm-a0a1x7arg3 | Parendozoicomonas haliclonae Thermostable monoacylglycerol lipase \; EC=3.1.1.23 | Parendozoicomonas haliclonae |
| 9prot-a0a1g0eb54 | Gallionellales bacterium 24-53-125 Uncharacterized protein | Gallionellales bacterium 24-53-125 |
| oceli-a0a1t1h8c5 | Oceanospirillum linum\; Oleiphilus messinensis Uncharacterized protein | Oceanospirillum linum |
| 9bact-a0a2e6xqg6 | Nitrospina sp Uncharacterized protein | Nitrospina sp. |
| vibtl-b7vqv8 | Vibrio tasmaniensis (splendidus)\; Vibrio atlanticus\; Vibrio lentus Putative lipoprotein | Vibrio splendidus |
| vibsp-a0a2g4azl1 | Vibrio splendidus (strain 12B01) Thermostable monoacylglycerol lipase \; EC=3.1.1.23 | Vibrio splendidus |
| vibsp-a0a2s7ulh9 | Vibrio splendidus\; Vibrionales bacterium Alpha\/beta hydrolase | Vibrio splendidus |
| vibsp-a0a2n7fh16 | Vibrio splendidus Esterase | Vibrio splendidus |
| 9vibr-a0a066uyh0 | Vibrio fortis Esterase | Vibrio fortis |
| 9vibr-v5hmn5 | Vibrio halioticoli\; Vibrio ishigakensis Uncharacterized protein Lysophospholipase \; EC=3.1.1.5 | Vibrio halioticoli NBRC 102217 |
| 9prot-a0a3e1ddi2 | Candidatus Nitrotoga sp. Esterase\/lipase | Candidatus Nitrotoga sp. |
| 9gamm-a0a166kyt4 | Oleiphilus sp. Uncharacterized protein | Oleiphilus sp. |
| 9zzzz-a0a1j5tb25 | ecological metagenomes mine drainage metagenome Thermostable monoacylglycerol lipase \; EC=3.1.1.23 | mine drainage metagenome |
| 9delt-a0a1f8wx62 | Deltaproteobacteria bacterium Uncharacterized protein | Deltaproteobacteria bacterium |
| 9gamm-r1iw43 | Grimontia indica\; Grimontia celer Lysophospholipase\; Thermostable monoacylglycerol lipase \; EC=3.1.1.23 | Grimontia indica |
| 9vibr-a0a1q9htn9 | Vibrio ponticus Uncharacterized protein | Vibrio ponticus |
| vibsp-a0a1e5b4r6 | Vibrio splendidus\; Vibrio cyclitrophicus\; Vibrio lentus\; Vibrio toranzoniae\; Vibrio kanaloae Esterase | Vibrio splendidus ZS-139 |
| 9gamm-a0a081n8y3 | Endozoicomonas montiporae Esterase | Endozoicomonas montiporae |
| 9delt-a0a1v5ect5 | Syntrophaceae bacterium PtaU1.Bin231 Thermostable monoacylglycerol lipase \; EC=3.1.1.23 | Syntrophaceae bacterium PtaU1.Bin231 |
| 9prot-a0a1f3x1l1 | Betaproteobacteria bacterium Uncharacterized protein | Betaproteobacteria bacterium |
| marm1-f2jx05 | Marinomonas mediterranea (strain ATCC 700492 \/ JCM 21426 \/ NBRC 103028 \/ MMB-1) Carboxylesterase | Marinomonas mediterranea |
| 9gamm-a0a1t4sga2 | Oceanospirillum multiglobuliferum Alpha\/beta hydrolase | Oceanospirillum multiglobuliferum |
| 9vibr-a0a1a6kzf8 | Vibrio sp. Esterase | Vibrio sp. |
| 9vibr-f9s736 | Vibrio ichthyoenteri ATCC 700023 Carboxylesterase | Vibrio ichthyoenteri ATCC 700023 |
| 9prot-a0a3b9nxx4 | Gallionellaceae bacterium Uncharacterized protein | Gallionellaceae bacterium |
| vibal-a0a1w6vj45 | Vibrio alginolyticus\; Vibrio sp.\; Vibrio crassostreae\; Vibrio celticus\; Vibrio splendidus Thermostable monoacylglycerol lipase \; EC=3.1.1.23 | Vibrio alginolyticus |
| 9delt-a0a1v4xgs7 | Syntrophaceae bacterium PtaB.Bin095 Thermostable monoacylglycerol lipase \; EC=3.1.1.23 | Syntrophaceae bacterium PtaB.Bin095 |
| alilo-a0a1b9ntc2 | Aliivibrio logei\; Aliivibrio salmonicida\; Aliivibrio sifiae \; Aliivibrio sp. Esterase | Aliivibrio logei |
| vibpr-u3bjx0 | Vibrio proteolyticus NBRC 13287 Uncharacterized protein | Vibrio proteolyticus NBRC 13287 |
| 9psed-a0a2t5zmw9 | Pseudomonas sp. Esterase\/lipase | Pseudomonas sp. |
| 9vibr-a0a193kii1 | Vibrio breoganii Esterase | Vibrio breoganii |
| 9prot-a0a1g3jed6 | Sideroxydans sp. Uncharacterized protein | Sideroxydans sp. RIFOXYB12_FULL_59_6 |
| 9psed-a0a0p9rgf4 | Pseudomonas syringae\; Pseudomonas caricapapayae Putative lipoprotein | Pseudomonas syringae pv. helianthi |
| 9coxi-a0a370gga0 | Aquicella lusitana Esterase\/lipase | Aquicella lusitana |
| 9vibr-a0a1q9hj29 | Vibrio panuliri Uncharacterized protein | Vibrio panuliri |
| 9psed-a0a329j3w4 | Pseudomonas sp. Alpha\/beta hydrolase | Pseudomonas sp. |
| 9vibr-a0a2n7deu0 | Vibrio sp. Esterase | Vibrio sp. |
| 9prot-a0a258zk06 | Gallionellales bacterium 24-53-125 Uncharacterized protein | Gallionellales bacterium 24-53-125 |
| 9vibr-a6cus5 | Vibrio shilonii\; Vibrio mediterranei\; Vibrio sp.\; Vibrio barjaei\; Vibrio thalassae Putative esterase\/lipase | Vibrio shilonii |
| 9vibr-e8lvd5 | Vibrio brasiliensis LMG 20546 Putative lipoprotein | Vibrio brasiliensis LMG 20546 |
| 9prot-a0a1j4zib8 | Gallionellaceae bacterium Uncharacterized protein | Gallionellaceae bacterium |
| sidle-d5cml4 | Sideroxydans lithotrophicus (strain ES-1) Uncharacterized protein | Sideroxydans lithotrophicus |
| 9gamm-a0a1q9gff9 | Photobacterium proteolyticum Esterase | Photobacterium proteolyticum |
| 9vibr-a0a0c2k1p6 | Vibrio renipiscarius Uncharacterized protein | Vibrio renipiscarius |
References (1)
| Title : The cold-active Lip1 lipase from the Antarctic bacterium Pseudoalteromonas haloplanktis TAC125 is a member of a new bacterial lipolytic enzyme family - de Pascale_2008_Extremophiles_12_311 |
| Author(s) : de Pascale D , Cusano AM , Autore F , Parrilli E , di Prisco G , Marino G , Tutino ML |
| Ref : Extremophiles , 12 :311 , 2008 |
| Abstract : |
| PubMedSearch : de Pascale_2008_Extremophiles_12_311 |
| PubMedID: 18437283 |
| Gene_locus related to this paper: pseht-q3if07 |