psele-PHAZ7
Pseudomonas lemoignei PHB depolymerase PhaZ7
Comment
Family IX Arpigny and Jaeger<\/A> Extracellular nPHASCL depolymerases
Relationship
Family : PHAZ7_phb_depolymerase
Block : X
Position in NCBI Life Tree : Pseudomonas lemoignei
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms N E > Bacteria N E > Proteobacteria N E > Betaproteobacteria N E > Burkholderiales N E > Burkholderiaceae N E > Paucimonas N E > Paucimonas lemoignei N EMolecular evidence
Sequence
Peptide
MISKLMGAQR FLPAVAATVT SLVWGLAGTL VAPGEAQALT CGTNSGFVCK GTQTQYAGGF APGVGYGGFG GGSCTATKTP VIFIHGNGDN AISFDMPPGN VSGYGTPARS VYAELKARGY NDCEIFGVTY LSSSEQGSAQ YNYHSSTKYA IIKTFIDKVK AYTGKSQVDI VAHSMGVSMS LATLQYYNNW TSVRKFINLA GGIRGLYSCY YTGYANAAAP TCGSQNYYNS YTFGFFPEGW YYGVWVSNPW TGSGSTNSMR DMPAKRTAVS FYTLSAGFKD QVGCATASFW AGCDSAAKFA STTSNVKAQI NVGAGSNATQ ADYDWADGMP YNAGGGDTTN GVGHFRTKTN TGAIIQRMLL TTCTGLDCAA EYTTGPKAAY
References (6)
| Title : Crystal structure analysis, covalent docking, and molecular dynamics calculations reveal a conformational switch in PhaZ7 PHB depolymerase - Kellici_2017_Proteins_85_1351 |
| Author(s) : Kellici TF , Mavromoustakos T , Jendrossek D , Papageorgiou AC |
| Ref : Proteins , 85 :1351 , 2017 |
| Abstract : |
| PubMedSearch : Kellici_2017_Proteins_85_1351 |
| PubMedID: 28370478 |
| Gene_locus related to this paper: psele-PHAZ7 |
| Title : Biochemical analysis and structure determination of Paucimonas lemoignei poly(3-hydroxybutyrate) (PHB) depolymerase PhaZ7 muteins reveal the PHB binding site and details of substrate-enzyme interactions - Jendrossek_2013_Mol.Microbiol_90_649 |
| Author(s) : Jendrossek D , Hermawan S , Subedi B , Papageorgiou AC |
| Ref : Molecular Microbiology , 90 :649 , 2013 |
| Abstract : |
| PubMedSearch : Jendrossek_2013_Mol.Microbiol_90_649 |
| PubMedID: 24007310 |
| Gene_locus related to this paper: psele-PHAZ7 |
| Title : The structure of PhaZ7 at atomic (1.2 A) resolution reveals details of the active site and suggests a substrate-binding mode - Wakadkar_2010_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_66_648 |
| Author(s) : Wakadkar S , Hermawan S , Jendrossek D , Papageorgiou AC |
| Ref : Acta Crystallographica Sect F Struct Biol Cryst Commun , 66 :648 , 2010 |
| Abstract : |
| PubMedSearch : Wakadkar_2010_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_66_648 |
| PubMedID: 20516591 |
| Gene_locus related to this paper: psele-PHAZ7 |
| Title : Structural basis of poly(3-hydroxybutyrate) hydrolysis by PhaZ7 depolymerase from Paucimonas lemoignei - Papageorgiou_2008_J.Mol.Biol_382_1184 |
| Author(s) : Papageorgiou AC , Hermawan S , Singh CB , Jendrossek D |
| Ref : Journal of Molecular Biology , 382 :1184 , 2008 |
| Abstract : |
| PubMedSearch : Papageorgiou_2008_J.Mol.Biol_382_1184 |
| PubMedID: 18706425 |
| Gene_locus related to this paper: psele-PHAZ7 |
| Title : Crystallization and preliminary X-ray analysis of a novel thermoalkalophilic poly(3-hydroxybutyrate) depolymerase (PhaZ7) from Paucimonas lemoignei - Kapetaniou_2005_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_61_479 |
| Author(s) : Kapetaniou EG , Braaz R , Jendrossek D , Papageorgiou AC |
| Ref : Acta Crystallographica Sect F Struct Biol Cryst Commun , 61 :479 , 2005 |
| Abstract : |
| PubMedSearch : Kapetaniou_2005_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_61_479 |
| PubMedID: 16511073 |
| Gene_locus related to this paper: psele-PHAZ7 |
| Title : A new type of thermoalkalophilic hydrolase of Paucimonas lemoignei with high specificity for amorphous polyesters of short chain-length hydroxyalkanoic acids - Handrick_2001_J.Biol.Chem_276_36215 |
| Author(s) : Handrick R , Reinhardt S , Focarete ML , Scandola M , Adamus G , Kowalczuk M , Jendrossek D |
| Ref : Journal of Biological Chemistry , 276 :36215 , 2001 |
| Abstract : |
| PubMedSearch : Handrick_2001_J.Biol.Chem_276_36215 |
| PubMedID: 11457823 |
| Gene_locus related to this paper: psele-PHAZ7 |