sphww-a5j2a5

Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) Meta-cleavage pathway hydrolase protein

Comment

Relationship

Block : X

Position in NCBI Life Tree : Sphingomonas wittichii

(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)

> cellular organisms N E > Bacteria N E > Proteobacteria N E > Alphaproteobacteria N E > Sphingomonadales N E > Sphingomonadaceae N E > Sphingomonas N E > Sphingomonas wittichii N E

Molecular evidence

No mutation

4LXG - Crystal structure of DxnB2, a carbon - carbon bond hydrolase from Sphingomonas wittichii RW1 4LXH - Crystal Structure of the S105A mutant of a carbon-carbon bond hydrolase, DxnB2 from Sphingomonas wittichii RW1, in complex with 3-Cl HOPDA 4LXI - Crystal Structure of the S105A mutant of a carbon-carbon bond hydrolase, DxnB2 from Sphingomonas wittichii RW1, in complex with 5,8-diF HOPDA 4LYD - Crystal structure of the S105A mutant of a C-C hydrolase, DxnB2 from Sphingomonas wittichii RW1 4LYE - Crystal structure of the S105A mutant of a C-C hydrolase, DxnB2 from Sphingomonas wittichii RW1, in complex with substrate HOPDA

No kinetic

No disease

HOPDA HOPDA-3-Cl HOPDA-5,8-diF

No inhibitor

Database

CP000699 DQ975235

A5J2A5 A5VAT9

Sequence

Peptide

MFEQFESKFI DCDGIRTHYI EMGEGDPLVL VHGGGAGADG RSNFADNFPI FARHMRVIAY DMVGFGQTDA PDPAGFAYTQ AARTDHLISF IKALGLSKIC LIGNSMGGTT ACGAALKAPE LIDRLVLMGA AVNISPDDMV ANRDDLAAVM SYDGSEEGMR KIIAALTHSY QPTDDIVHYR HEASLRPTTT AAYKATMGWA KQNGLYYSPE QLASLTMPVL VLGGKNDVMV PVRKVIDQIL AIPQAQAIGH VFPNCGHWVM IEYPEEFCTQ TLHFFGKLD

References (3)

Title : The Lid Domain of the MCP Hydrolase DxnB2 Contributes to the Reactivity toward Recalcitrant PCB Metabolites - Ruzzini_2013_Biochemistry_52_5685

Author(s) : Ruzzini AC , Bhowmik S , Yam KC , Ghosh S , Bolin JT , Eltis LD

Ref : Biochemistry , 52 :5685 , 2013

Abstract :

PubMedSearch : Ruzzini_2013_Biochemistry_52_5685

PubMedID: 23879719

Gene_locus related to this paper: sphww-a5j2a5

Title : A substrate-assisted mechanism of nucleophile activation in a ser-his-asp containing C-C bond hydrolase - Ruzzini_2013_Biochemistry_52_7428

Author(s) : Ruzzini AC , Bhowmik S , Ghosh S , Yam KC , Bolin JT , Eltis LD

Ref : Biochemistry , 52 :7428 , 2013

Abstract :

PubMedSearch : Ruzzini_2013_Biochemistry_52_7428

PubMedID: 24067021

Gene_locus related to this paper: sphww-a5j2a5

Title : Characterization of a C-C bond hydrolase from Sphingomonas wittichii RW1 with novel specificities towards polychlorinated biphenyl metabolites - Seah_2007_J.Bacteriol_189_4038

Author(s) : Seah SY , Ke J , Denis G , Horsman GP , Fortin PD , Whiting CJ , Eltis LD

Ref : Journal of Bacteriology , 189 :4038 , 2007

Abstract :

PubMedSearch : Seah_2007_J.Bacteriol_189_4038

PubMedID: 17416660

Gene_locus related to this paper: sphww-a5j2a5

sphww-a5j2a5

Comment

Relationship

Molecular evidence

Mutation (0)

Structure (5)

Kinetic (0)

Disease (0)

Substrate (3)

Inhibitor (0)

Database

Genbank (2)

Interpro (2)

Pfam (2)

UniProt (2)

PIRSF (2)

SUPERFAM (2)

Sequence

Peptide

References (3)

1. The Lid Domain of the MCP Hydrolase DxnB2 Contributes to the Reactivity toward Recalcitrant PCB Metabolites - Ruzzini_2013_Biochemistry_52_5685

2. A substrate-assisted mechanism of nucleophile activation in a ser-his-asp containing C-C bond hydrolase - Ruzzini_2013_Biochemistry_52_7428

3. Characterization of a C-C bond hydrolase from Sphingomonas wittichii RW1 with novel specificities towards polychlorinated biphenyl metabolites - Seah_2007_J.Bacteriol_189_4038