Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: 9bact-b5jq87

Verrucomicrobiae bacterium DG1235 Putative uncharacterized protein

Relationship
Family|PlaB
Block| X
Position in NCBI Life Tree|Verrucomicrobiae bacterium DG1235
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > PVC group: N E > Verrucomicrobia: N E > Verrucomicrobiae: N E > unclassified Verrucomicrobiae: N E > Verrucomicrobiae bacterium DG1235: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : DS990592
1 UniProt : B5JQ87
1 UniProt : B5JQ87
1 Interpro : B5JQ87
1 Pfam : B5JQ87
1 PIRSF : B5JQ87
1 SUPERFAM : B5JQ87
Sequence
Graphical view for this peptide sequence: 9bact-b5jq87
Colored MSA for PlaB (raw)
MLPIVLIHGYSSEGSSNTAETIYGTLPSELRSHFGAEVLDINLSRWISLS
DGIALDDVSFAMERALQSQSAKLADGFHVIIHSTGALVVRNWIKLYSPKP
CPIHNLVHLAGANFGSGLAHIGRGQMARWARFFKGTGRGVRVLDELEFGS
SKTIDLHAHFIDAGNDMYHDYQVQEFCLIGSQTLSSMRHIPIRYVKEDSS
DNTVRTSAGNLNYNFLRVAPVDSAYSISINKLKNLISQRKSDELLDTSSI
YQFDLSDVASERQAVPYFIAYETAHFGEDIGIVTGSDNRKEIVPLVKQAL
ATEYDEDAYAATAESFETARQQTFKRAAKLRWSALEWNKQSQYEGHAQLI
FRLKDQFGTEISDFDITIKSTPPGTRKNKLEHMIEDKHLNKKNKGTITFY
LRTQKFNKRSKKWTELLDRVPTVHLEITAHEDKSDDIEFAPLSIKLTPTN
IRALIQTFRTTIVDVTLLRLPSPKVFSLK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MLPIVLIHGYSSEGSSNTAETIYGTLPSELRSHFGAEVLDINLSRWISLS
DGIALDDVSFAMERALQSQSAKLADGFHVIIHSTGALVVRNWIKLYSPKP
CPIHNLVHLAGANFGSGLAHIGRGQMARWARFFKGTGRGVRVLDELEFGS
SKTIDLHAHFIDAGNDMYHDYQVQEFCLIGSQTLSSMRHIPIRYVKEDSS
DNTVRTSAGNLNYNFLRVAPVDSAYSISINKLKNLISQRKSDELLDTSSI
YQFDLSDVASERQAVPYFIAYETAHFGEDIGIVTGSDNRKEIVPLVKQAL
ATEYDEDAYAATAESFETARQQTFKRAAKLRWSALEWNKQSQYEGHAQLI
FRLKDQFGTEISDFDITIKSTPPGTRKNKLEHMIEDKHLNKKNKGTITFY
LRTQKFNKRSKKWTELLDRVPTVHLEITAHEDKSDDIEFAPLSIKLTPTN
IRALIQTFRTTIVDVTLLRLPSPKVFSLK



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer