Gene_Locus Report

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Gene_locus Report for: 9bact-c6kwi7

uncultured bacterium 2-hydroxymuconic semialdehyde hydrolase

Relationship
Family|Carbon-carbon_bond_hydrolase
Block| X
Position in NCBI Life Tree|uncultured bacterium
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > environmental samples: N E > uncultured bacterium: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AB266148
1 UniProt : C6KWI7
1 UniProt : C6KWI7
1 Interpro : C6KWI7
1 Prodom : C6KWI7
1 Pfam : C6KWI7
1 PIRSF : C6KWI7
1 SUPERFAM : C6KWI7
Sequence
Graphical view for this peptide sequence: 9bact-c6kwi7
Colored MSA for Carbon-carbon_bond_hydrolase (raw)
MTDNPEIGQEITVAGLRTNYHDIGAGRPVFFIHGSGPGVSAWANWRLNLQ
AIADRGLRCIAPDMAGFGFTEAPADLRFTRELWVDHFHALVEALVGDEQI
AIVGNSFGGAIALAYAIRYPERVDRLVLMGAVGLDFPITDALDRVWGHVA
TPENMRAMMQIFAYDQSLVSDDLAELRHRASIRPGVMEAFAAMFPEPRQQ
ALRALASDEADVAGIAVPALILHGSDDRVIPVEVSHRLFALLPEAELHLF
RGCGHWTQIEKAQRFNQIAGDFLA
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MTDNPEIGQEITVAGLRTNYHDIGAGRPVFFIHGSGPGVSAWANWRLNLQ
AIADRGLRCIAPDMAGFGFTEAPADLRFTRELWVDHFHALVEALVGDEQI
AIVGNSFGGAIALAYAIRYPERVDRLVLMGAVGLDFPITDALDRVWGHVA
TPENMRAMMQIFAYDQSLVSDDLAELRHRASIRPGVMEAFAAMFPEPRQQ
ALRALASDEADVAGIAVPALILHGSDDRVIPVEVSHRLFALLPEAELHLF
RGCGHWTQIEKAQRFNQIAGDFLA


References
    Title: Novel organization of aromatic degradation pathway genes in a microbial community as revealed by metagenomic analysis
    Suenaga H, Koyama Y, Miyakoshi M, Miyazaki R, Yano H, Sota M, Ohtsubo Y, Tsuda M, Miyazaki K
    Ref: Isme J, 3:1335, 2009 : PubMed

            

    Title: Functional screening of a metagenomic library for genes involved in microbial degradation of aromatic compounds
    Suenaga H, Ohnuki T, Miyazaki K
    Ref: Environ Microbiol, 9:2289, 2007 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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