Gene_Locus Report

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Gene_locus Report for: 9bifi-b6xub6

Bifidobacterium catenulatum DSM 16992 Putative uncharacterized protein

Relationship
Family|A85-Est-Putative
Block| X
Position in NCBI Life Tree|Bifidobacterium catenulatum DSM 16992
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Actinobacteria [phylum]: N E > Actinobacteria [class]: N E > Bifidobacteriales: N E > Bifidobacteriaceae: N E > Bifidobacterium: N E > Bifidobacterium catenulatum: N E > Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : ABXY01000011
1 UniProt : B6XUB6
1 UniProt : B6XUB6
1 Interpro : B6XUB6
1 Pfam : B6XUB6
1 PIRSF : B6XUB6
1 SUPERFAM : B6XUB6
Sequence
Graphical view for this peptide sequence: 9bifi-b6xub6
Colored MSA for A85-Est-Putative (raw)
MRAWLMNISLVDGWFPATLFSITAVLAAILLGIAIWEMVDGSRGGGKRAI
AVVACPMVIAVIAGIVGLVIAWLLSDVFVVFGVELGPRVIAWAGCGCAIV
GFAVSHVMLHRGVLRAVAVILVVCAVFSTATGIDQAYGEYATIGSLFGQD
SYREADLTGMAKRSDLISVTQWRQEAADGSISDIPAHGEVSKVNIPATTS
HFEARQALVYLPPAALVTAKHKPALPVILMMSGQPGSPGRVFAAGGIQTM
MDDYAQHHGGLAPIVIAADQLGDDSHNTLCVDSPVYGKALTYLTKDVVDW
VKTNLPAAWQAQDWAIAGFSQGATCSLQIGANHPNLFGTIIPTGSELKPT
NGSESSMISRFFHGDRTAYEKQIPINAIRNHAPSNQTLVIGAGERDRESV
RNVELIAPVAQQEGMHVTAVESLGNAHDWHAVRDTLRYGLVVFGYNTGLS
DAKPKLADYPNLKRITI
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MRAWLMNISLVDGWFPATLFSITAVLAAILLGIAIWEMVDGSRGGGKRAI
AVVACPMVIAVIAGIVGLVIAWLLSDVFVVFGVELGPRVIAWAGCGCAIV
GFAVSHVMLHRGVLRAVAVILVVCAVFSTATGIDQAYGEYATIGSLFGQD
SYREADLTGMAKRSDLISVTQWRQEAADGSISDIPAHGEVSKVNIPATTS
HFEARQALVYLPPAALVTAKHKPALPVILMMSGQPGSPGRVFAAGGIQTM
MDDYAQHHGGLAPIVIAADQLGDDSHNTLCVDSPVYGKALTYLTKDVVDW
VKTNLPAAWQAQDWAIAGFSQGATCSLQIGANHPNLFGTIIPTGSELKPT
NGSESSMISRFFHGDRTAYEKQIPINAIRNHAPSNQTLVIGAGERDRESV
RNVELIAPVAQQEGMHVTAVESLGNAHDWHAVRDTLRYGLVVFGYNTGLS
DAKPKLADYPNLKRITI



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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