Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: 9firm-b0n4i1

Clostridium ramosum DSM 1402 Coprobacillus sp. D7 Putative uncharacterized protein

Relationship
Family|A85-IroE-IroD-Fes-Yiel
Block| X
Position in NCBI Life Tree|Clostridium ramosum DSM 1402
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Firmicutes: N E > Erysipelotrichia: N E > Erysipelotrichales: N E > Erysipelotrichaceae: N E > Erysipelatoclostridium: N E > Erysipelatoclostridium ramosum: N E > Erysipelatoclostridium ramosum DSM 1402: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : ABFX02000005, EQ999884
1 UniProt : B0N4I1
1 UniProt : B0N4I1
1 Interpro : B0N4I1
1 Pfam : B0N4I1
1 PIRSF : B0N4I1
1 SUPERFAM : B0N4I1
Sequence
Graphical view for this peptide sequence: 9firm-b0n4i1
Colored MSA for A85-IroE-IroD-Fes-Yiel (raw)
MFIEENMYMRSLRRKRKITIYVPDDYETSNKRYPVLYINDGQNAFFDETS
YMKISWGFYDYVQAQNLDVIMVAIPCNNRLNKREDEYGPWRIGKEILMME
YGDDSLEIGGEGDKYLRFIIKQLKPYIDTHFPTIVEDSAMVGSSMGGIIT
TYAGLKYPHIFKKTASLSSAYWFYMDELIDLIHRSDLSATQCFYLDLGGN
EGNGDEEMSRIYYESNETIYNELIKKSNRIEGRFFEEAGHNEYEWRQRVP
IFMDLFYK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MFIEENMYMRSLRRKRKITIYVPDDYETSNKRYPVLYINDGQNAFFDETS
YMKISWGFYDYVQAQNLDVIMVAIPCNNRLNKREDEYGPWRIGKEILMME
YGDDSLEIGGEGDKYLRFIIKQLKPYIDTHFPTIVEDSAMVGSSMGGIIT
TYAGLKYPHIFKKTASLSSAYWFYMDELIDLIHRSDLSATQCFYLDLGGN
EGNGDEEMSRIYYESNETIYNELIKKSNRIEGRFFEEAGHNEYEWRQRVP
IFMDLFYK



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer