Gene_locus Report for: 9gamm-a0yg58 marine gamma proteobacterium HTCC2143 Predicted hydrolase of the alpha/beta-hydrolase fold protein
Relationship
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Cellvibrionales: N E > Spongiibacteraceae: N E > unclassified Spongiibacteraceae: N E > BD1-7 clade: N E > marine gamma proteobacterium HTCC2143: N E 6_AlphaBeta_hydrolase :
9gamm-a0y7m1 marine gamma proteobacterium HTCC2143 carboxylesterase (est-3) ,
9gamm-a0y7x6 marine gamma proteobacterium HTCC2143 alpha/beta hydrolase ,
9gamm-a0yab8 marine gamma proteobacterium HTCC2143 3-oxoadipate enol-lactone hydrolase ,
9gamm-a0yad1 marine gamma proteobacterium HTCC2143 Putative hydrolase ,
9gamm-a0ybr8 marine gamma proteobacterium HTCC2143 predicted hydrolase or acyltransferase ,
9gamm-a0ydp1 marine gamma proteobacterium HTCC2143 putative hydrolase ,
9gamm-a0yh06 marine gamma proteobacterium HTCC2143 hydrolase, putative ,
9gamm-a0yhi0 marine gamma proteobacterium HTCC2143 Putative uncharacterized protein ,
9gamm-a0yhx0 marine gamma proteobacterium HTCC2143 Predicted Hydrolase or acyltransferase (Alpha/beta hydrolase superfamily) protein .
A85-EsteraseD-FGH :
9gamm-a0yaw7 marine gamma proteobacterium HTCC2143 Putative esterase .
abh_upf00227 :
9gamm-a0y9k1 marine gamma proteobacterium HTCC2143. Uncharacterized protein .
Aclacinomycin-methylesterase_RdmC :
9gamm-a0ycy2 marine gamma proteobacterium HTCC2143 probable hydrolase (fragment) .
AlphaBeta_hydrolase :
9gamm-a0y7n1 marine gamma proteobacterium HTCC2143 Hydrolase, alpha/beta hydrolase fold family protein ,
9gamm-a0yg15 marine gamma proteobacterium HTCC2143 Cysteine proteinase .
Carb_B_Bacteria :
9gamm-a0yar2 marine gamma proteobacterium HTCC2143 putative esterase ,
9gamm-a0yem2 marine gamma proteobacterium HTCC2143 carboxylesterase, type b ,
9gamm-a0yfs7 marine gamma proteobacterium HTCC2143 putative uncharacterized protein ,
9gamm-a0yg00 marine gamma proteobacterium HTCC2143 putative uncharacterized protein ,
9gamm-a0yga3 marine gamma proteobacterium HTCC2143 putative uncharacterized protein ,
9gamm-a0ygu0 marine gamma proteobacterium HTCC2143 putative uncharacterized protein .
Duf_3089 :
9gamm-a0yhi1 marine gamma proteobacterium HTCC2143 Putative uncharacterized protein .
Duf_3530 :
9gamm-a0y831 marine gamma proteobacterium HTCC2143 Putative uncharacterized protein .
Epoxide_hydrolase :
9gamm-a0y7z1 marine gamma proteobacterium HTCC2143 EphA ,
9gamm-a0y8h0 marine gamma proteobacterium HTCC2143 Alpha/beta hydrolase fold protein ,
9gamm-a0y8i9 marine gamma proteobacterium HTCC2143 Putative uncharacterized protein ,
9gamm-a0yab3 marine gamma proteobacterium HTCC2143 hydrolase, putative ,
9gamm-a0yac9 marine gamma proteobacterium HTCC2143 Putative hydrolase ,
9gamm-a0yft3 marine gamma proteobacterium HTCC2143 Alpha/beta hydrolase fold protein ,
9gamm-a0yfz8 marine gamma proteobacterium HTCC2143 Putative epoxide hydrolase ,
9gamm-a0yh83 marine gamma proteobacterium HTCC2143 Epoxide hydrolase ,
9gamm-a0yhi4 marine gamma proteobacterium HTCC2143 Putative epoxide hydrolase .
Fungal-Bact_LIP :
9gamm-a0ygx1 marine gamma proteobacterium HTCC2143 Secretory lipase family protein .
GTSAGmotif :
9gamm-a0ya83 marine gamma proteobacterium HTCC2143 Esterase .
Haloalkane_dehalogenase-HLD1 :
9gamm-a0ydx7 marine gamma proteobacterium HTCC2143 Haloalkane dehalogenase ,
9gamm-a0yei4 marine gamma proteobacterium HTCC2143 Haloalkane dehalogenase .
Haloperoxidase :
9gamm-a0yd32 marine gamma proteobacterium HTCC2143 putative uncharacterized protein .
Homoserine_transacetylase :
9gamm-a0y9n9 marine gamma proteobacterium HTCC2143 Homoserine O-trans-acetylase .
Hormone-sensitive_lipase_like :
9gamm-a0y7y9 marine gamma proteobacterium HTCC2143. Possible esterase ,
9gamm-a0ybk0 BD1-7 clade marine gamma proteobacterium HTCC2143 Esterase/lipase/thioesterase .
Monoglyceridelipase_lysophospholip :
9gamm-a0y9r5 marine gamma proteobacterium HTCC2143 Lysophospholipase ,
9gamm-a0ygu3 marine gamma proteobacterium HTCC2143 Putative hydrolase .
PHA_synth_III_C :
9gamm-a0y7n9 marine gamma proteobacterium HTCC2143 Probable poly-beta-hydroxybutyrate polymerase .
Proline_iminopeptidase :
9gamm-a0y8t1 marine gamma proteobacterium HTCC2143 Proline iminopeptidase ,
9gamm-a0yai7 marine gamma proteobacterium HTCC2143. Alpha/beta hydrolase fold protein Molecular evidence
Database
No mutation No structure No kinetic No Substrate No inhibitor
Sequence
Graphical view for this peptide sequence: 9gamm-a0yg58 Colored MSA for abh_upf0017 (raw)
MENYTPPTLFKNPHVQSIMASAGPRKLIMRRRAKKLTDSATTHILDCGNG
IRLQGEYSQHADNNKGLVILIHGWLGGNDSMYLLSSANALFLDGFNVFRL
NLRDHGGSGHLNRGLFNSARLDEVVNAVHQVQQLFPHPYNYLAGFSLGGN
FVLRVANKAPANNIALDKVVSVCPVINPGKTNVNIQQGLFIYHDYFYKKW
KRSLLNKLDHFPEYDYREKLKTLKTLDEMTQYFVPNHTDFDNIDEYLKGY
SIDGDYLSELAVPCHIISSIDDPVIEAKDLRQLSQSPQLTVELTRYGGHC
GYIDSFKLTSWIDRRLKELMSPACNNSAHSIVT
Legend
This sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA
M E N Y T P P T L F K N P H V Q S I M A S A G P R K L I M R R R A K K L T D S A T T H I L D C G N G I R L Q G E Y S Q H A D N N K G L V I L I H G W L G G N D S M Y L L S S A N A L F L D G F N V F R L N L R D H G G S G H L N R G L F N S A R L D E V V N A V H Q V Q Q L F P H P Y N Y L A G F S L G G N F V L R V A N K A P A N N I A L D K V V S V C P V I N P G K T N V N I Q Q G L F I Y H D Y F Y K K W K R S L L N K L D H F P E Y D Y R E K L K T L K T L D E M T Q Y F V P N H T D F D N I D E Y L K G Y S I D G D Y L S E L A V P C H I I S S I D D P V I E A K D L R Q L S Q S P Q L T V E L T R Y G G H C G Y I D S F K L T S W I D R R L K E L M S P A C N N S A H S I V T
Reference
Title: Genome sequence of the oligotrophic marine Gammaproteobacterium HTCC2143, isolated from the Oregon CoastOh HM , Kang I , Ferriera S , Giovannoni SJ , Cho JC Ref: Journal of Bacteriology, 192 :4530, 2010 : PubMed Abstract ESTHER: Oh_2010_J.Bacteriol_192_4530 PubMedSearch: Oh 2010 J.Bacteriol 192 4530 PubMedID: 20601481 Gene_locus related to this paper: 9gamm-a0y7n1 ,
9gamm-a0y7n9 ,
9gamm-a0y7z1 ,
9gamm-a0y8h0 ,
9gamm-a0y8i9 ,
9gamm-a0y8t1 ,
9gamm-a0y9n9 ,
9gamm-a0y9r5 ,
9gamm-a0y831 ,
9gamm-a0yac9 ,
9gamm-a0yad1 ,
9gamm-a0yaw7 ,
9gamm-a0ydx7 ,
9gamm-a0yei4 ,
9gamm-a0yft3 ,
9gamm-a0yfz8 ,
9gamm-a0yg15 ,
9gamm-a0yg58 ,
9gamm-a0ygu3 ,
9gamm-a0ygx1 ,
9gamm-a0yh83 ,
9gamm-a0yhi0 ,
9gamm-a0yhi1 ,
9gamm-a0yhi4 ,
9gamm-a0yhx0 ,
9gamm-a0ya83 ,
9gamm-a0yai7 ,
9gamm-a0y9k1 ,
9gamm-a0y7y9 Abstract
Strain HTCC2143 was isolated from Oregon Coast surface waters using dilution-to-extinction culturing. Here we present the genome of strain HTCC2143 from the BD1-7 clade of the oligotrophic marine Gammaproteobacteria group. The genome of HTCC2143 contains genes for carotenoid biosynthesis and proteorhodopsin and for proteins that have potential biotechnological significance: epoxide hydrolases, Baeyer-Villiger monooxygenases, and polyketide synthases.
Other Papers
