Gene_Locus Report

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Gene_locus Report for: 9gamm-f7rx96

Idiomarina sp. A28L Alpha/beta hydrolase superfamily enzyme, predicted hydrolase

Relationship
Family|NLS3-Tex30
Block| X
Position in NCBI Life Tree|Idiomarina sp. A28L
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Alteromonadales: N E > Idiomarinaceae: N E > Idiomarina: N E > Idiomarina sp. A28L: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AFPO01000011
1 UniProt : F7RX96
1 UniProt : F7RX96
1 Interpro : F7RX96
1 Pfam : F7RX96
1 PIRSF : F7RX96
1 SUPERFAM : F7RX96
Sequence
Graphical view for this peptide sequence: 9gamm-f7rx96
Colored MSA for NLS3-Tex30 (raw)
MAIFVFAHGAGAGPESEFMQAISANLEQKGHKVHRFAFPYWQIIEQSGKK
RPPDKQNVLDAAFIDEVAKVRKGSEDIPLVVMGKSMGARVAFRCADSVNA
VAAIGLGFPFHPPGKQEKHRLAELENSRKRNFVVHGTSDPFGKPEWLAEQ
TLPKNLKMHWVEGGNHDLSRPKRSGLTNTESWQLVSREIDAFVTKLIK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MAIFVFAHGAGAGPESEFMQAISANLEQKGHKVHRFAFPYWQIIEQSGKK
RPPDKQNVLDAAFIDEVAKVRKGSEDIPLVVMGKSMGARVAFRCADSVNA
VAAIGLGFPFHPPGKQEKHRLAELENSRKRNFVVHGTSDPFGKPEWLAEQ
TLPKNLKMHWVEGGNHDLSRPKRSGLTNTESWQLVSREIDAFVTKLIK


Reference
    Title: Genome sequence of Idiomarina sp. strain A28L, isolated from Pangong Lake, India
    Gupta HK, Singh A, Sharma R
    Ref: Journal of Bacteriology, 193:5875, 2011 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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