Gene_Locus Report
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Gene_locus Report for: 9gamm-g7eka6

Pseudoalteromonas sp. BSi20652. Putative uncharacterized protein

Comment
only n-term Pfam A DUF2235 4 137 Pfam A DUF2235 131 238


Relationship
Family|Duf_2235
Block| X
Position in NCBI Life Tree|Pseudoalteromonas sp. BSi20652
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Alteromonadales: N E > Pseudoalteromonadaceae: N E > Pseudoalteromonas: N E > Pseudoalteromonas sp. BSi20652: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : BADT01000189
1 UniProt : G7EKA6
1 UniProt : G7EKA6
1 Interpro : G7EKA6
1 Pfam : G7EKA6
1 PIRSF : G7EKA6
1 SUPERFAM : G7EKA6
Sequence
Peptide
Graphical view for this peptide sequence: 9gamm-g7eka6
Colored MSA for Duf_2235 (raw) 
MTGKTLIFNFDGTGNEPRDAEQFSSDHFKEDVSISNILKLHLLLGGKLED
SPVTPFANQLSFYYQGIGTKGSRLKRILNQALAPQSDDVASILNQALSDF
KAHYQLGDTILLTGFSRGAALARRFAKCLEPLISNNVYVCVFDTVASIGL
SKVSKATRGAEHVIFENHTIANNITQALHCVALDEKRRAFEPTLMNHQSN
ITELWFAGAHSDIGGGYYRDGLADICLRYALEWLIEQPLTISLLTSHDID
YEALLPNSNLIAQDDVTVIPDPLALSHQQNYFWFNPLFKLIDRD
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA
MTGKTLIFNFDGTGNEPRDAEQFSSDHFKEDVSISNILKLHLLLGGKLED
SPVTPFANQLSFYYQGIGTKGSRLKRILNQALAPQSDDVASILNQALSDF
KAHYQLGDTILLTGFSRGAALARRFAKCLEPLISNNVYVCVFDTVASIGL
SKVSKATRGAEHVIFENHTIANNITQALHCVALDEKRRAFEPTLMNHQSN
ITELWFAGAHSDIGGGYYRDGLADICLRYALEWLIEQPLTISLLTSHDID
YEALLPNSNLIAQDDVTVIPDPLALSHQQNYFWFNPLFKLIDRD

Reference
    Title: Genome sequences of six Pseudoalteromonas strains isolated from Arctic sea ice
    Bian F, Xie BB, Qin QL, Shu YL, Zhang XY, Yu Y, Chen B, Chen XL, Zhou BC, Zhang YZ
    Ref: Journal of Bacteriology, 194:908, 2012 : PubMed

            


Other Papers

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
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