Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: 9gamm-q1uec0

Psychrobacter sp. PRwf-1 hypothetical protein

Relationship
Family|PGAP1
Block| X
Position in NCBI Life Tree|Psychrobacter sp. PRwf-1
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Pseudomonadales: N E > Moraxellaceae: N E > Psychrobacter: N E > Psychrobacter sp. PRwf-1: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
3 Genbank : AAPX01000008, WP_011961283, ABQ95010
1 UniProt : A5WH69
1 Interpro : A5WH69
1 Pfam : A5WH69
1 PIRSF : A5WH69
1 SUPERFAM : A5WH69
Sequence
Graphical view for this peptide sequence: 9gamm-q1uec0
Colored MSA for PGAP1 (raw)
MSNSTSPTSPASEDLSQQYSLYETCELINASNPVYLEDLHQQLDHLDYLD
ENALINMAYEPSAPSKKPPLSVSNVLEGLVQLATTGAVGATEIIEAIHSE
ILLRPLGRFNEDHLNRWQQGVTRRLYNVVRYTMQSVGRGVTSSSMQLYRK
SLINQKRRLLPERLKQLVNVINGMVGDHLVARDNPLAVPMVLYDRYGQPL
GAKADPLCGRVIVLCHGLCLSYLSWHPCEEDSLGEHIALSVPKSTVLYLD
YNTGRRISQNGHNLANLLQQLVIKNPDITQIDLVGYSMGGLVSRSALFYG
EQERQDWVAHVGNLVTIGSPHQGAILERISYHLLDIMAKVPFAGSLSKLG
DIRSAGIIDLRHGCIRDEDWKGLKVRDVLPEDFRHPTKLPRHINTFFIAG
SIAEGVYESKASNLVGDGLVMIESALGEAGKTHENHHLYVPEGRKAVFYG
VNHINLQYDERVHNQVSEWLQANRDSESALKPRIHSFPDEIEVVV
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSNSTSPTSPASEDLSQQYSLYETCELINASNPVYLEDLHQQLDHLDYLD
ENALINMAYEPSAPSKKPPLSVSNVLEGLVQLATTGAVGATEIIEAIHSE
ILLRPLGRFNEDHLNRWQQGVTRRLYNVVRYTMQSVGRGVTSSSMQLYRK
SLINQKRRLLPERLKQLVNVINGMVGDHLVARDNPLAVPMVLYDRYGQPL
GAKADPLCGRVIVLCHGLCLSYLSWHPCEEDSLGEHIALSVPKSTVLYLD
YNTGRRISQNGHNLANLLQQLVIKNPDITQIDLVGYSMGGLVSRSALFYG
EQERQDWVAHVGNLVTIGSPHQGAILERISYHLLDIMAKVPFAGSLSKLG
DIRSAGIIDLRHGCIRDEDWKGLKVRDVLPEDFRHPTKLPRHINTFFIAG
SIAEGVYESKASNLVGDGLVMIESALGEAGKTHENHHLYVPEGRKAVFYG
VNHINLQYDERVHNQVSEWLQANRDSESALKPRIHSFPDEIEVVV



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer