Gene_Locus Report

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Gene_locus Report for: 9noca-b6vjl0

Rhodococcus sp. T104 CinD

Relationship
Family|Carbon-carbon_bond_hydrolase
Block| X
Position in NCBI Life Tree|Rhodococcus sp. T104
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Actinobacteria [phylum]: N E > Actinobacteria [class]: N E > Corynebacteriales: N E > Nocardiaceae: N E > Rhodococcus: N E > Rhodococcus sp. T104: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : FJ418564
1 UniProt : B6VJL0
1 UniProt : B6VJL0
1 Interpro : B6VJL0
1 Prodom : B6VJL0
1 Pfam : B6VJL0
1 PIRSF : B6VJL0
1 SUPERFAM : B6VJL0
Sequence
Graphical view for this peptide sequence: 9noca-b6vjl0
Colored MSA for Carbon-carbon_bond_hydrolase (raw)
MGFPVTSATTTDIELRHHTVHTSLGEIAVAEVPGEGPVLVMLHGGGPGAS
GVSNYHQNLAALSKRFRILLPDQPGFGGSYRPTEADLDERSITQITVDAL
FQALDALGVGTFHLLGNSLGGAAAIAMAQTQRDRVTGLVLMAPGGGWLPF
GPTPTEGQKEMFKYFNGGPSEKKMASFIRTMVFDHKQFGEDVVRARYEAS
LDESHIAFYHLYNAAFAKRHGMDPLWKDLHLIKAPTLLLWGRDDRTITLE
GAQIILKQIPNVQMHVFGKCGHWVQLERAAEFERLVADFLGDLG
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MGFPVTSATTTDIELRHHTVHTSLGEIAVAEVPGEGPVLVMLHGGGPGAS
GVSNYHQNLAALSKRFRILLPDQPGFGGSYRPTEADLDERSITQITVDAL
FQALDALGVGTFHLLGNSLGGAAAIAMAQTQRDRVTGLVLMAPGGGWLPF
GPTPTEGQKEMFKYFNGGPSEKKMASFIRTMVFDHKQFGEDVVRARYEAS
LDESHIAFYHLYNAAFAKRHGMDPLWKDLHLIKAPTLLLWGRDDRTITLE
GAQIILKQIPNVQMHVFGKCGHWVQLERAAEFERLVADFLGDLG



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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