Gene_Locus Report

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Gene_locus Report for: 9sphn-q3vd53

Sphingopyxis alaskensis RB2256 peptidase s9, prolyl oligopeptidase active site region precursor

Comment
Other strains: Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) (Sphingomonas alaskensis)


Relationship
Family|ACPH_Peptidase_S9
Block| X
Position in NCBI Life Tree|Sphingopyxis alaskensis RB2256
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Alphaproteobacteria: N E > Sphingomonadales: N E > Sphingomonadaceae: N E > Sphingopyxis: N E > Sphingopyxis alaskensis: N E > Sphingopyxis alaskensis RB2256: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
3 Genbank : AAIP01000006, WP_011542294, ABF53718
1 UniProt : Q1GRK4
1 Interpro : Q1GRK4
1 Pfam : Q1GRK4
1 PIRSF : Q1GRK4
1 SUPERFAM : Q1GRK4
Sequence
Graphical view for this peptide sequence: 9sphn-q3vd53
Colored MSA for ACPH_Peptidase_S9 (raw)
MRKLALFGTALIALTAQPLWAQQEEAPAQQPPASETPAATPTPMPAAAVG
SARTGPERRFTGADLFDLAIAADPQISPDGRHIAYVRRANDIMTDRAVSS
IWLIDTATGRETPLAGQDGPAFSPRWSPDGSRLAYVSAAGGSAQLWVRWM
DGGEAVRLTGLPTSPSSLTWAPDGRSIAYTMLVKDEGARLGSAPANKPEG
AKWAEPLDVRTLLTYRADGQGYVEPGFEKIFLIPATGGAPRQLTFGPYHD
GGPLSWSRDGRTLYFSANRQAEWETDPLESEIHALDVASGAIATLTDRNG
PDANPLVSPDGRLIAYLGFDDALRAYEQTELYVMNRDGSGRRRIAANWDY
SVDAVQWGADSRSLYVQYDDHGETKVARVTLDGSVRDVAKGLSGGGLDRP
YTGGSFTVAGNGAIAFTGGTATRPAEVQLARGGGEARMLTDLNRTLREVK
SLAQVRKITVASSHDGLPIEGWLTLPPGYVEGQRVPLILEIHGGPFTAYG
PHFSTDNQLYAAAGYAVLSANPRGSTSYGEAFAQQIDKAYPGNDYFDLIS
IVDQAIALGIADPDALFVTGGSGGGVLTSWIVGKTNRFKAAATQKPVINW
QTQALTADGPAFFGPYWLGAQPWEDPERYWARSPLSLVGNVETPTLVVVG
GEDYRTPVSESEQYYTALRLRGVPTALVKVPGASHGGIAARPSQSAAKAA
AILAWFDKYRKGWTRPAASD
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MRKLALFGTALIALTAQPLWAQQEEAPAQQPPASETPAATPTPMPAAAVG
SARTGPERRFTGADLFDLAIAADPQISPDGRHIAYVRRANDIMTDRAVSS
IWLIDTATGRETPLAGQDGPAFSPRWSPDGSRLAYVSAAGGSAQLWVRWM
DGGEAVRLTGLPTSPSSLTWAPDGRSIAYTMLVKDEGARLGSAPANKPEG
AKWAEPLDVRTLLTYRADGQGYVEPGFEKIFLIPATGGAPRQLTFGPYHD
GGPLSWSRDGRTLYFSANRQAEWETDPLESEIHALDVASGAIATLTDRNG
PDANPLVSPDGRLIAYLGFDDALRAYEQTELYVMNRDGSGRRRIAANWDY
SVDAVQWGADSRSLYVQYDDHGETKVARVTLDGSVRDVAKGLSGGGLDRP
YTGGSFTVAGNGAIAFTGGTATRPAEVQLARGGGEARMLTDLNRTLREVK
SLAQVRKITVASSHDGLPIEGWLTLPPGYVEGQRVPLILEIHGGPFTAYG
PHFSTDNQLYAAAGYAVLSANPRGSTSYGEAFAQQIDKAYPGNDYFDLIS
IVDQAIALGIADPDALFVTGGSGGGVLTSWIVGKTNRFKAAATQKPVINW
QTQALTADGPAFFGPYWLGAQPWEDPERYWARSPLSLVGNVETPTLVVVG
GEDYRTPVSESEQYYTALRLRGVPTALVKVPGASHGGIAARPSQSAAKAA
AILAWFDKYRKGWTRPAASD



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
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