Gene_Locus Report

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Gene_locus Report for: 9zzzz-k2eg80

groundwater metagenome. Uncharacterized protein

Relationship
Family|Atu1826-like
Block| X
Position in NCBI Life Tree|groundwater metagenome
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> unclassified sequences: N E > metagenomes: N E > ecological metagenomes: N E > groundwater metagenome: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AMFJ01003679
1 UniProt : K2EG80
1 UniProt : K2EG80
1 Interpro : K2EG80
1 Pfam : K2EG80
1 PIRSF : K2EG80
1 SUPERFAM : K2EG80
Sequence
Graphical view for this peptide sequence: 9zzzz-k2eg80
Colored MSA for Atu1826-like (raw)
MPEVIFPGPEGRLEGRYHPQKERDAPIAIVLHPHPAYGGTMNNKVVYNLH
YAFYNLGFTVLRFNFRGVGRSQGEYDMGIGELSDAASALDYLQSMNQNAK
HCWVAGFSFGAWIGMQLLMRRPEITGFISVAPPANLYDFSFLAPCPASGL
IINGTADKVAPPKDTVNLVNKLHEQKGITITHTQIEGADHFFKDEEAHMK
PMIDTVSGYVKRRLTEVTR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPEVIFPGPEGRLEGRYHPQKERDAPIAIVLHPHPAYGGTMNNKVVYNLH
YAFYNLGFTVLRFNFRGVGRSQGEYDMGIGELSDAASALDYLQSMNQNAK
HCWVAGFSFGAWIGMQLLMRRPEITGFISVAPPANLYDFSFLAPCPASGL
IINGTADKVAPPKDTVNLVNKLHEQKGITITHTQIEGADHFFKDEEAHMK
PMIDTVSGYVKRRLTEVTR


Reference
    Title: Fermentation, hydrogen, and sulfur metabolism in multiple uncultivated bacterial phyla
    Wrighton KC, Thomas BC, Sharon I, Miller CS, Castelle CJ, VerBerkmoes NC, Wilkins MJ, Hettich RL, Lipton MS and Banfield JF <2 more author(s)>
    Ref: Science, 337:1661, 2012 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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