Gene_Locus Report
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Gene_locus Report for: arath-Q9FN74

Arabidopsis thaliana (Mouse-ear cress) Putative uncharacterized protein

Relationship
Family|Bodyguard
Block| X
Position in NCBI Life Tree|Arabidopsis thaliana
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > eudicotyledons: N E > Gunneridae: N E > Pentapetalae: N E > rosids: N E > malvids: N E > Brassicales: N E > Brassicaceae: N E > Camelineae: N E > Arabidopsis: N E > Arabidopsis thaliana: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AB006706
3 UniProt : B3H685, Q700D5, Q9FN74
3 UniProt : Q9FN74, Q700D5, B3H685
3 Interpro : Q9FN74, Q700D5, B3H685
3 Pfam : Q9FN74, Q700D5, B3H685
3 PIRSF : Q9FN74, Q700D5, B3H685
3 SUPERFAM : Q9FN74, Q700D5, B3H685
1 Tair database : At5g17780
Sequence
Peptide
Graphical view for this peptide sequence: arath-Q9FN74
Colored MSA for Bodyguard (raw) 
MSFPRKFGTAIHAALSFIVFFFLDLLDAILCVVYEFVDEILEENSTGCYC
TAAAPQSQTTDENELSSETLFGRRNIFRGMWFLGFAREFKSKLSRKLRKS
KIHQESVNRWSDCGCKSCKSWTKNEDGNLHVVVKDSTSREYSVQEPSENV
IFIHGFMGSSHFWTETVFEHIQKDDYRLLAIDLLGFGESPKPRDSLYTLK
DHVDTIERSVIKPYQLDSFHVVAHSMGCLIALALAAKHSNIVKSVTLVAP
PYFPSSVEGSVLNRIARKRLWPPLAFGTAVMSWYEHIGRCVCFIICKHHK
IWEWLIKLCIGKREIHWKIKDITRHTHHSAWHSMHNVICGGSKVADEHLE
TLIKSGVKIHLMQGDCDQIVPSHCSGNMKRTFPAVEVDIITGADHDSMIS
GRGEEFAEKLESIWCSC
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA
MSFPRKFGTAIHAALSFIVFFFLDLLDAILCVVYEFVDEILEENSTGCYC
TAAAPQSQTTDENELSSETLFGRRNIFRGMWFLGFAREFKSKLSRKLRKS
KIHQESVNRWSDCGCKSCKSWTKNEDGNLHVVVKDSTSREYSVQEPSENV
IFIHGFMGSSHFWTETVFEHIQKDDYRLLAIDLLGFGESPKPRDSLYTLK
DHVDTIERSVIKPYQLDSFHVVAHSMGCLIALALAAKHSNIVKSVTLVAP
PYFPSSVEGSVLNRIARKRLWPPLAFGTAVMSWYEHIGRCVCFIICKHHK
IWEWLIKLCIGKREIHWKIKDITRHTHHSAWHSMHNVICGGSKVADEHLE
TLIKSGVKIHLMQGDCDQIVPSHCSGNMKRTFPAVEVDIITGADHDSMIS
GRGEEFAEKLESIWCSC

References
    Title: Genome-wide ORFeome cloning and analysis of Arabidopsis transcription factor genes
    Gong W, Shen YP, Ma LG, Pan Y, Du YL, Wang DH, Yang JY, Hu LD, Liu XF and Zhu YX <22 more author(s)>
    Ref: Plant Physiol, 135:773, 2004 : PubMed

            

    Title: Structural analysis of Arabidopsis thaliana chromosome 5. II. Sequence features of the regions of 1,044,062 bp covered by thirteen physically assigned P1 clones
    Kotani H, Nakamura Y, Sato S, Kaneko T, Asamizu E, Miyajima N, Tabata S
    Ref: DNA Research, 4:291, 1997 : PubMed

            


Other Papers

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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