Gene_Locus Report

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Gene_locus Report for: bacld-q65iy4

Bacillus licheniformis, Bacillus atrophaeus, Geobacillus sp., hypothetical protein (putative choline esterase)

Comment
Other strains: Bacillus licheniformis (strain DSM 13 / ATCC 14580), Bacillus atrophaeus (strain 1942), Geobacillus sp. (strain Y412MC10)


Relationship
Family|PAF-Acetylhydrolase
Block| X
Position in NCBI Life Tree|Bacillus licheniformis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Firmicutes: N E > Bacilli: N E > Bacillales: N E > Bacillaceae: N E > Bacillus: N E > Bacillus subtilis group: N E > Bacillus licheniformis: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : AE017333, CP000002
2 UniProt : Q65IY4, D3EFH8
2 UniProt : Q65IY4, D3EFH8
2 Interpro : Q65IY4, D3EFH8
2 Prodom : Q65IY4, D3EFH8
2 Pfam : Q65IY4, D3EFH8
2 PIRSF : Q65IY4, D3EFH8
2 SUPERFAM : Q65IY4, D3EFH8
Sequence
Graphical view for this peptide sequence: bacld-q65iy4
Colored MSA for PAF-Acetylhydrolase (raw)
MKTYDAFPEPIGGYTVGRTQMDFEYTASDHSKRELTAFVYYPSDSSEGKT
TSTYMFPEVYEMFNEQPLVTALKDVFSIDIKTQCYDDLALSGKEKRYPVL
FYVCGGGGSPEWGTVICTDLASMGYVVVSIGHQNSTMYKRKDGRLFNVSK
DFSDVIMAFSEDPEMLALAGKMEMRPDDETAIEMCHNVLTLPILAKLTEY
SELQAEDVRYVADYLYKLDSGELNSIFKGRLLLDIGMGIVGHSYGGPTTA
IVCRDDDRFACGIGLDSGAFGLLDSDLKKPFLLLFCEPNYNMNAIIGANN
SMETYYFSVDRVAHLDYCDIVFTSVNEELRGERDAMEMRNLVTDYTKNFF
DHYILLKAASVESLAYDGVDLIKKTSNK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MKTYDAFPEPIGGYTVGRTQMDFEYTASDHSKRELTAFVYYPSDSSEGKT
TSTYMFPEVYEMFNEQPLVTALKDVFSIDIKTQCYDDLALSGKEKRYPVL
FYVCGGGGSPEWGTVICTDLASMGYVVVSIGHQNSTMYKRKDGRLFNVSK
DFSDVIMAFSEDPEMLALAGKMEMRPDDETAIEMCHNVLTLPILAKLTEY
SELQAEDVRYVADYLYKLDSGELNSIFKGRLLLDIGMGIVGHSYGGPTTA
IVCRDDDRFACGIGLDSGAFGLLDSDLKKPFLLLFCEPNYNMNAIIGANN
SMETYYFSVDRVAHLDYCDIVFTSVNEELRGERDAMEMRNLVTDYTKNFF
DHYILLKAASVESLAYDGVDLIKKTSNK


References
    Title: Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species
    Rey MW, Ramaiya P, Nelson BA, Brody-Karpin SD, Zaretsky EJ, Tang M, Lopez de Leon A, Xiang H, Gusti V and Berka RM <11 more author(s)>
    Ref: Genome Biol, 5:R77, 2004 : PubMed

            

    Title: The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential
    Veith B, Herzberg C, Steckel S, Feesche J, Maurer KH, Ehrenreich P, Baumer S, Henne A, Liesegang H and Gottschalk G <2 more author(s)>
    Ref: J Molecular Microbiology Biotechnol, 7:204, 2004 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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