Gene_locus Report for: brasb-a5ees1 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Putative Hydrolase, alpha/beta hydrolase fold family
Relationship
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Alphaproteobacteria: N E > Rhizobiales: N E > Bradyrhizobiaceae: N E > Bradyrhizobium: N E > Bradyrhizobium sp.: N E 6_AlphaBeta_hydrolase :
brasb-a5e8s7 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Putative uncharacterized protein ,
brasb-a5ech6 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Putative alpha/beta hydrolase ,
brasb-a5eh09 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Putative alpha/beta-Hydrolases superfamily ,
brasb-a5elh0 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Putative alpha/beta hydrolase ,
brasb-a5ene5 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Putative uncharacterized protein ,
brasb-a5ep81 Bradyrhizobium sp. (strains BTAi1 / ATCC BAA-1182; ORS278) Putative hydrolase, alpha/beta fold family ,
brasb-a5eqb3 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Putative alpha/beta hydrolase fold protein ,
brasb-a5esv5 Bradyrhizobium sp. Putative DNA-binding transcriptional activator of the SARP family /hydrolases or acyltransferases (Alpha/beta hydrolase superfamily) ,
braso-a4yk16 Bradyrhizobium sp. (strain ORS278) Putative uncharacterized protein ,
braso-a4yl66 Bradyrhizobium sp. (strain ORS278) Putative uncharacterized protein ,
braso-a4ynl1 Bradyrhizobium sp. (strain ORS278) Putative alpha/beta hydrolase fold ,
braso-a4yqh3 Bradyrhizobium sp. (strain ORS278) Putative Alpha/beta hydrolase; putative Carboxylesterase/3-oxoadipate enol-lactonase ,
braso-a4yw76 Bradyrhizobium sp. (strain ORS278) Putative enzyme with alpha/beta-hydrolase domain; putative triacylglycerol lipase (Esterase) ,
braso-a4yyj6 Bradyrhizobium sp. (strain ORS278) Putative uncharacterized protein ,
braso-a4z0v7 Bradyrhizobium sp. (strain ORS278) Putative alpha/beta hydrolase; putative haloalkane dehalogenase ,
braso-a4z1p1 Bradyrhizobium sp. (strain ORS278) (strain BTAi1 / ATCC BAA-1182) Putative alpha/beta-Hydrolases superfamily; putative 3-oxoadipate enol-lactonase .
A85-EsteraseD-FGH :
brasb-a5eny8 Bradyrhizobium sp. (strains BTAi1 / ATCC BAA-1182; ORS278) S-formylglutathione hydrolase .
Abhydrolase_9 :
9brad-a0a0d7pdd9 Bradyrhizobium sp. Membrane protein ,
9brad-a0a0x8cpp1 Bradyrhizobium sp. Uncharacterized protein ,
9brad-a0a150u9u7 Bradyrhizobium sp. Membrane protein ,
9brad-a0a150zbn4 Bradyrhizobium sp. Membrane protein ,
9brad-a0a160v195 Bradyrhizobium sp.; Bradyrhizobium japonicum Uncharacterized protein ,
9brad-a0a176yuk6 Bradyrhizobium sp. Uncharacterized protein ,
9brad-a0a1c3u8y2 Bradyrhizobium sp. Uncharacterized membrane protein ,
9brad-i2qc78 Bradyrhizobium sp. Putative membrane protein .
Aclacinomycin-methylesterase_RdmC :
brasb-a5efp4 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182; ORS278) Putative uncharacterized protein ,
braso-a4yr10 Bradyrhizobium sp. (strain ORS278) Putative uncharacterized protein .
BD-FAE :
9brad-a0a0q5zcb2 Bradyrhizobium sp. Uncharacterized protein .
Carboxymethylbutenolide_lactonase :
brasb-a5ema7 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) (strain ORS278) 3-oxoadipate enol-lactonase ,
9brad-h0sxc0 Bradyrhizobium sp. 3-oxoadipate enol-lactonase (Enol-lactone hydrolase) (Beta-ketoadipate enol-lactone hydrolase) .
Carb_B_Bacteria :
9brad-a0a265pr64 Bradyrhizobium amphicarpaeae; Bradyrhizobium sp. 2(2017). Esterase ,
9brad-a0a265qdb0 Bradyrhizobium sp. 3(2017). Esterase ,
braso-a4yzd7 Bradyrhizobium sp. (strains ORS278, STM 3809) putative carboxylesterase, type b (EC 3.1.1.1) .
CFTR-inhibitory-factor_Cif :
brasb-a5edz7 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Putative hydrolase ,
brasb-a5emc8 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Putative hydrolase ,
braso-a4ypd9 Bradyrhizobium sp. (strain ORS278) Putative hydrolase ,
braso-a4z2a5 Bradyrhizobium sp. (strain ORS278) Putative hydrolase .
Chlorophyllase :
brasz-a0a160uhs5 Bradyrhizobium sp. Uncharacterized protein ,
braso-a4yr63 Bradyrhizobium sp.. Putative hydrolase .
Dienelactone_hydrolase :
brasz-naac Bradyrhizobium sp. Lactone hydrolase NaaC .
Duf_3141 :
brasb-a5ef53 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Putative uncharacterized protein ,
brasb-a5eg29 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Putative uncharacterized protein ,
brasb-a5eul1 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Putative uncharacterized protein ,
braso-a4z1h1 Bradyrhizobium sp. (strain ORS278) Putative uncharacterized protein .
Epoxide_hydrolase :
brasb-a5eb24 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Putative hydrolase, alpha/beta fold family ,
brasb-a5efp3 Bradyrhizobium sp. Putative epoxide hydrolase ,
brasb-a5ej26 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Putative epoxide hydrolase ,
braso-a4ylm4 Bradyrhizobium sp. (strains ORS278; BTAi1 / ATCC BAA-1182) Putative Hydrolase, alpha/beta fold family ,
braso-a4ylr9 Bradyrhizobium sp. (strains ORS278; BTAi1 / ATCC BAA-1182) Putative epoxide hydrolase ,
braso-a4yul4 Bradyrhizobium sp. (strain ORS278) Epoxide hydrolase ,
braso-a4yxg2 Bradyrhizobium sp. (strain ORS278)(strain BTAi1 / ATCC BAA-1182) Putative uncharacterized protein ,
braso-a4z1v6 Bradyrhizobium sp. (strain ORS278) Putative hydrolase, alpha/beta fold family .
Est-OsmC :
9brad-a0a0d7p6z6 Bradyrhizobium sp. esterase found in n-term of an OsmC/Ohr family domain ,
9brad-a0a120fq09 Bradyrhizobium sp. esterase found in n-term of an OsmC/Ohr family domain ,
9brad-a0a1b9z3k4 Bradyrhizobium sp. esterase found in n-term of an OsmC/Ohr family domain ,
9brad-h0tcp6 Bradyrhizobium sp. esterase found in n-term of an OsmC/Ohr family domain ,
9brad-a0a1i3km41 Bradyrhizobium sp. esterase found in n-term of an OsmC/Ohr family domain .
Haloacetate_dehalogenase :
braso-a4z0q9 Bradyrhizobium sp. (strain ORS278) Putative hydrolase .
Haloperoxidase :
brasb-a5ed44 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Non-heme chloroperoxidase ,
brasb-a5ee62 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Non-heme chloroperoxidase ,
braso-a4ylx7 Bradyrhizobium sp. (strain ORS278) Arylesterase (Aryl-ester hydrolase) ,
braso-a4yri0 Bradyrhizobium sp. (strain ORS278) BTAi1 Non-heme chloroperoxidase (Chloride peroxidase) (CPO-P) (Chloroperoxidase P) ,
braso-a4ywb6 Bradyrhizobium sp. (strain ORS278) (strain BTAi1 / ATCC BAA-1182) Non-heme chloroperoxidase (Chloride peroxidase) (CPO-P) (Chloroperoxidase P) ,
braso-a4yy49 Bradyrhizobium sp. (strains ORS278; BTAi1 / ATCC BAA-1182) Non-heme haloperoxidase .
HNLyase_Bact :
brasb-a5ei81 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Putative alpha/beta hydrolase family protein ,
brasb-a5esw6 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Putative esterase ,
braso-a4yt56 Bradyrhizobium sp. (strain ORS278) Putative alpha/beta hydrolase family protein .
Homoserine_transacetylase :
braso-a4z1p8 Bradyrhizobium sp. (strain ORS278) (BTAi1 / ATCC BAA-1182)) Homoserine O-acetyltransferase (Homoserine O-trans-acetylase) (Homoserine transacetylase) (HTA) .
Mg-chelatase_BchO :
braso-a4ynl2 Bradyrhizobium sp. (strain ORS278). Bradyrhizobium sp. ORS278,complete sequence ,
brasb-a5eqb2 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182). Putative Alpha/beta hydrolase, putative protoporphyrin IX magnesium chelatase bchO-like protein .
Monoglyceridelipase_lysophospholip :
brasb-a5eph8 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Putative uncharacterized protein ,
braso-a4yzh0 Bradyrhizobium sp. (strain ORS278) Putative uncharacterized protein ,
braso-a4z152 Bradyrhizobium sp. (strains ORS278; BTAi1 / ATCC BAA-1182) Putative lysophospholipase L2, (Lecithinase B) .
NLS3-Tex30 :
braso-a4yl32 Bradyrhizobium sp. (strain ORS278) Uncharacterized protein ,
brasb-a5et63 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Uncharacterized protein .
Proline_iminopeptidase :
brasb-a5epx9 Bradyrhizobium sp. (strains BTAi1 / ATCC BAA-1182; ORS278) Proline iminopeptidase ,
brasb-a5emr8 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182). Putative Prolyl aminopeptidase .
UCP031982 :
brasb-a5eac3 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Putative hydrolase, putative exported protein ,
brasb-a5eiy7 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Putative hydrolase, putative exported protein ,
brasb-a5eml7 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Putative uncharacterized protein ,
brasb-a5erc8 Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) Putative LIPOprotein SIGNAL PEPTIDE ,
braso-a4ymj8 Bradyrhizobium sp. (strain ORS278) Putative LIPOPROTEIN SIGNAL PEPTIDE Molecular evidence
Database
No mutation No structure No kinetic No Substrate No inhibitor
Sequence
Graphical view for this peptide sequence: brasb-a5ees1 Colored MSA for 6_AlphaBeta_hydrolase (raw)
MRAALLALLLLLPTGTLYAEPLWQTLPPTPAPVSGVRSGRAAINGISLYY
GTIGQGSPVVLLHGGLSNSDYWGHQVKALARTHRVIIVDSRGHGRSTRDA
RPYGYDLMADDVVALLDKLSIRKADIVGWSDGAILGLDLAIRHPERVRKV
FAFAANTLTSGVQEGVEKNPVFARFIERARGEYAKLSATPGDYDAFVAQI
TRMWESEPNWTDGQLQSIRATVLVVDGDHDEAIKRAHTEYIAATIPNAGL
LILPNTSHFAFLQDPELFNAALLHFLDGE
Legend
This sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA
M R A A L L A L L L L L P T G T L Y A E P L W Q T L P P T P A P V S G V R S G R A A I N G I S L Y Y G T I G Q G S P V V L L H G G L S N S D Y W G H Q V K A L A R T H R V I I V D S R G H G R S T R D A R P Y G Y D L M A D D V V A L L D K L S I R K A D I V G W S D G A I L G L D L A I R H P E R V R K V F A F A A N T L T S G V Q E G V E K N P V F A R F I E R A R G E Y A K L S A T P G D Y D A F V A Q I T R M W E S E P N W T D G Q L Q S I R A T V L V V D G D H D E A I K R A H T E Y I A A T I P N A G L L I L P N T S H F A F L Q D P E L F N A A L L H F L D G E
Reference
Title: Legumes symbioses: absence of Nod genes in photosynthetic bradyrhizobiaGiraud E , Moulin L , Vallenet D , Barbe V , Cytryn E , Avarre JC , Jaubert M , Simon D , Cartieaux F and Sadowsky M <24 more author(s)> Giraud E , Moulin L , Vallenet D , Barbe V , Cytryn E , Avarre JC , Jaubert M , Simon D , Cartieaux F , Prin Y , Bena G , Hannibal L , Fardoux J , Kojadinovic M , Vuillet L , Lajus A , Cruveiller S , Rouy Z , Mangenot S , Segurens B , Dossat C , Franck WL , Chang WS , Saunders E , Bruce D , Richardson P , Normand P , Dreyfus B , Pignol D , Stacey G , Emerich D , Vermeglio A , Medigue C , Sadowsky M (- 24) Ref: Science, 316 :1307, 2007 : PubMed Abstract ESTHER: Giraud_2007_Science_316_1307 PubMedSearch: Giraud 2007 Science 316 1307 PubMedID: 17540897 Gene_locus related to this paper: brasb-a5e8s7 ,
brasb-a5e9h9 ,
brasb-a5e9x2 ,
brasb-a5eac3 ,
brasb-a5eb24 ,
brasb-a5ech6 ,
brasb-a5eck9 ,
brasb-a5ed44 ,
brasb-a5edz7 ,
brasb-a5ee62 ,
brasb-a5ees1 ,
brasb-a5ef53 ,
brasb-a5efp3 ,
brasb-a5efp4 ,
brasb-a5eg29 ,
brasb-a5eh09 ,
brasb-a5ei81 ,
brasb-a5eiy7 ,
brasb-a5ej26 ,
brasb-a5ek41 ,
brasb-a5elh0 ,
brasb-a5ema7 ,
brasb-a5emc8 ,
brasb-a5eml7 ,
brasb-a5ene5 ,
brasb-a5ent6 ,
brasb-a5eny8 ,
brasb-a5ep81 ,
brasb-a5eph8 ,
brasb-a5epv4 ,
brasb-a5epx9 ,
brasb-a5eqb3 ,
brasb-a5erc8 ,
brasb-a5esb1 ,
brasb-a5ese9 ,
brasb-a5esl7 ,
brasb-a5esv5 ,
brasb-a5esw6 ,
brasb-a5etk7 ,
brasb-a5eul1 ,
braso-a4yk16 ,
braso-a4yl66 ,
braso-a4ylm4 ,
braso-a4ylr9 ,
braso-a4ylx7 ,
braso-a4ymj8 ,
braso-a4ynl1 ,
braso-a4ypd9 ,
braso-a4yqh3 ,
braso-a4yr10 ,
braso-a4yri0 ,
braso-a4yt56 ,
braso-a4yul4 ,
braso-a4yw76 ,
braso-a4ywb6 ,
braso-a4yxg2 ,
braso-a4yy49 ,
braso-a4yyj6 ,
braso-a4yzd7 ,
braso-a4yzh0 ,
braso-a4z0q9 ,
braso-a4z0v7 ,
braso-a4z1h1 ,
braso-a4z1p1 ,
braso-a4z1p8 ,
braso-a4z1v6 ,
braso-a4z2a5 ,
braso-a4z152 ,
braso-a4yl32 ,
brasb-a5et63 ,
brasb-a5emr8 ,
braso-a4ynl2 ,
brasb-a5eqb2 ,
braso-a4yr63 Abstract
Leguminous plants (such as peas and soybeans) and rhizobial soil bacteria are symbiotic partners that communicate through molecular signaling pathways, resulting in the formation of nodules on legume roots and occasionally stems that house nitrogen-fixing bacteria. Nodule formation has been assumed to be exclusively initiated by the binding of bacterial, host-specific lipochito-oligosaccharidic Nod factors, encoded by the nodABC genes, to kinase-like receptors of the plant. Here we show by complete genome sequencing of two symbiotic, photosynthetic, Bradyrhizobium strains, BTAi1 and ORS278, that canonical nodABC genes and typical lipochito-oligosaccharidic Nod factors are not required for symbiosis in some legumes. Mutational analyses indicated that these unique rhizobia use an alternative pathway to initiate symbioses, where a purine derivative may play a key role in triggering nodule formation.
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