(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) > cellular organisms: NE > Bacteria: NE > Proteobacteria: NE > Betaproteobacteria: NE > Neisseriales: NE > Chromobacteriaceae: NE > Chromobacterium group: NE > Chromobacterium: NE > Chromobacterium violaceum: NE
LegendThis sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA MNMSHSLALKGIAAATLLACALPAAIAAGYQQPPANILKVMRAPSLPGPS LSPTQDNMLLVAWQEYPSIARVAAPYLKLAGTRIEPANRSKHDTPGGYGI APCAESFKLVSVPGGKETPIALPAGACPDAPLWSADGKRFAFANTTRDAV EVWVGDAASGKIRKIPGIRLNPMLNDELQWMPDQKTLLVKAVPAKLGAAP AQANTQDGPSVQDSGGGKGESSTYETRDTLSSPHDEALFDYYGASQLTLV DAASGKATPLGQPAIYDGVGPAPDGKHILVSSVRKPYSYVTTYERFPHQV EVWNIATPGRVAVHTIASLPLADRVPVHGEPLGPRDFFWRATEPATLLWA EALDGGDWKNTAPARDKVMMQKAPFTAPPVEVLRTAQRFAGLDWTERADI ALASEVDLNKHWRQTRVVNVDQPQQAGKLLWDLSYDDKYADPGSPVRRAL PNGERVIQLDGDAIYLAGGGASPQGNRPFLDKLDLKTGDSQRLFRSDKSA YERFIGLSGKDGGSFLTWRQTPAEAPNAFLRKLGAPIRADKGEAAFASTA AAVTRIVDPTPELRQIKKRLVKYKRADGLDLSFTLYTPPGYQEGTRVPAI LNAYPLDYADAASAGQISGSQQTFTRLYQYKYLLLAGYAVIDQASFPVVG NPKAAYDNYLDQLKMDAEAAVNEAVKLGVADPDRVAVTGHSHGALMTANL LAHTDLFRAGAATSGSYNKTLTPFGFQSERRSVWEAPDVYRKVSTFFYAD KLKTPILIMHGSDDANPGTTPLQASKFYEAIRGNGGTARLVMLPHEPHWY AARESNEQLVYEMLSWFDKYVKNAPPRAVKSAQSQPLPAQP
Reference
Title: The complete genome sequence of Chromobacterium violaceum reveals remarkable and exploitable bacterial adaptability Ribeiro de Vasconcelos AT, Brazilian National Genome Project Consortium Ref: Proceedings of the National Academy of Sciences of the United States of America, 100:11660, 2003 : PubMed
Chromobacterium violaceum is one of millions of species of free-living microorganisms that populate the soil and water in the extant areas of tropical biodiversity around the world. Its complete genome sequence reveals (i) extensive alternative pathways for energy generation, (ii) approximately 500 ORFs for transport-related proteins, (iii) complex and extensive systems for stress adaptation and motility, and (iv) widespread utilization of quorum sensing for control of inducible systems, all of which underpin the versatility and adaptability of the organism. The genome also contains extensive but incomplete arrays of ORFs coding for proteins associated with mammalian pathogenicity, possibly involved in the occasional but often fatal cases of human C. violaceum infection. There is, in addition, a series of previously unknown but important enzymes and secondary metabolites including paraquat-inducible proteins, drug and heavy-metal-resistance proteins, multiple chitinases, and proteins for the detoxification of xenobiotics that may have biotechnological applications.
