Gene_Locus Report

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Gene_locus Report for: cyncs-a0a103xrx7

Cynara cardunculus var. scolymus (Artichoke) (Cynara scolymus), Putative uncharacterized protein

Relationship
Family|Duf_1350
Block| X
Position in NCBI Life Tree|Cynara cardunculus var. scolymus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > eudicotyledons: N E > Gunneridae: N E > Pentapetalae: N E > asterids: N E > campanulids: N E > Asterales: N E > Asteraceae: N E > Carduoideae: N E > Cardueae: N E > Carduinae: N E > Cynara: N E > Cynara cardunculus: N E > Cynara cardunculus subsp. cardunculus: N E > Cynara cardunculus var. scolymus: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 UniProt : A0A103XRX7
1 Interpro : A0A103XRX7
1 Pfam : A0A103XRX7
1 PIRSF : A0A103XRX7
1 SUPERFAM : A0A103XRX7
Sequence
Graphical view for this peptide sequence: cyncs-a0a103xrx7
Colored MSA for Duf_1350 (raw)
MASSLWVSYGKFASPQFESKLCRSHVRLYGIHHHPQSSVGFRKVNSFKVL
CRNSDGQNSNNQPGRTGIQLYSEIERLLTETVRQSQDGWGGSRDWHEVEG
AWVLNPKNSKPTSVVHFVGGIFVGAAPQLTYRLFLERLSEKGVLVIATPY
PSGFDHFFIADEVQFKFDRCLRSLHETVKDLPCFGIGHSLGSVIHLLIGS
RYAVQRSGNVYMAFNNKVLGHFSFHI
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MASSLWVSYGKFASPQFESKLCRSHVRLYGIHHHPQSSVGFRKVNSFKVL
CRNSDGQNSNNQPGRTGIQLYSEIERLLTETVRQSQDGWGGSRDWHEVEG
AWVLNPKNSKPTSVVHFVGGIFVGAAPQLTYRLFLERLSEKGVLVIATPY
PSGFDHFFIADEVQFKFDRCLRSLHETVKDLPCFGIGHSLGSVIHLLIGS
RYAVQRSGNVYMAFNNKVLGHFSFHI



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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