Gene_Locus Report

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Gene_locus Report for: cyncs-a0a103ynz3

Cynara cardunculus var. scolymus (Globe artichoke) (Cynara scolymus). Peptidase S9, prolyl oligopeptidase, catalytic domain-containing protein

Relationship
Family|Glutamyl_Peptidase_S9
Block| X
Position in NCBI Life Tree|Cynara cardunculus var. scolymus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > eudicotyledons: N E > Gunneridae: N E > Pentapetalae: N E > asterids: N E > campanulids: N E > Asterales: N E > Asteraceae: N E > Carduoideae: N E > Cardueae: N E > Carduinae: N E > Cynara: N E > Cynara cardunculus: N E > Cynara cardunculus subsp. cardunculus: N E > Cynara cardunculus var. scolymus: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : LEKV01000001
1 UniProt : A0A103YNZ3
1 UniProt : A0A103YNZ3
1 Interpro : A0A103YNZ3
1 Pfam : A0A103YNZ3
1 PIRSF : A0A103YNZ3
1 SUPERFAM : A0A103YNZ3
Sequence
Graphical view for this peptide sequence: cyncs-a0a103ynz3
Colored MSA for Glutamyl_Peptidase_S9 (raw)
MRLHKVYHHLLSHTSPPFLLHPSSTLFSSSSPSFLFSKSCRISPSTTPST
LNPPHQPFLQPMSVSRLHNLAPIGAIATENVAASSSPFSNATPTPEDDDE
LNSGYRLPPPEIRDIVDAPPLPALSFSPQRDKILFLKRRSLPPLSELAKP
EDKLAGIRIDGKSNTRSRMSFYTGIGIHDLRDDGTLGPEKLVHGFPDGSK
LNFVTWSTDGRHLAFSIRQEQEDDGGNKLRVWVADVETGKAKPLFQSPNV
FLNAIFDNYVWVNNSTLLVCTIPASRGSPPKKPLVPSGPKIQSNEQKSVV
QVRTFQDLLKDEYDEDLFEYYATSQLVLVSLDGTVKLFGEPALYTSLDPS
PDEKYILLSSVHRPFSFTVPCGRFPKKVDLWSADGNLMKTLCDLPVAEDI
PIAFNSVRKGMRSLNWRADKPSTLYWVETQDGGDAKVEVSPRDIVYTQDA
DATQGEEPKIFYELDLRYGGISWCNDSLALIYESWYKTRRVRTWLVSPGF
NETPRLLFDRSSEDVYSDPGSPMLRRTPAGTYVIAKFKKEDNEGTYLLLN
GSGATPEGNIPFLDLFNIGSGEKERIWQSDKEKYYESVVALMSDQNAGDL
YVNQLKVLTSKESKTENTQYYIQRWPDRKACQITSFPHPYPQLASLQKEM
VRYQRKDGVQLTATLYLPPGYDPSRDGPLPCLLWSYPGEFKNKEAAGQVR
GSPNEYAILSGPTIPIIGEGKEEANDSYVEQLVGSAEAAVEEVIRRGVAH
PDKIAIGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNED
RTLWDATDTYIKMSPFMSANKIKKPILLIHGEEDNNSGTLTMQSDRFFNA
LKGHGALCRLVVLPFESHGYASRESIMHVLWETDRWLDKFCVSNSCSEEG
GSSEDKVIASGGVAAEADPDIGLDDDDSLHFTTRSSL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MRLHKVYHHLLSHTSPPFLLHPSSTLFSSSSPSFLFSKSCRISPSTTPST
LNPPHQPFLQPMSVSRLHNLAPIGAIATENVAASSSPFSNATPTPEDDDE
LNSGYRLPPPEIRDIVDAPPLPALSFSPQRDKILFLKRRSLPPLSELAKP
EDKLAGIRIDGKSNTRSRMSFYTGIGIHDLRDDGTLGPEKLVHGFPDGSK
LNFVTWSTDGRHLAFSIRQEQEDDGGNKLRVWVADVETGKAKPLFQSPNV
FLNAIFDNYVWVNNSTLLVCTIPASRGSPPKKPLVPSGPKIQSNEQKSVV
QVRTFQDLLKDEYDEDLFEYYATSQLVLVSLDGTVKLFGEPALYTSLDPS
PDEKYILLSSVHRPFSFTVPCGRFPKKVDLWSADGNLMKTLCDLPVAEDI
PIAFNSVRKGMRSLNWRADKPSTLYWVETQDGGDAKVEVSPRDIVYTQDA
DATQGEEPKIFYELDLRYGGISWCNDSLALIYESWYKTRRVRTWLVSPGF
NETPRLLFDRSSEDVYSDPGSPMLRRTPAGTYVIAKFKKEDNEGTYLLLN
GSGATPEGNIPFLDLFNIGSGEKERIWQSDKEKYYESVVALMSDQNAGDL
YVNQLKVLTSKESKTENTQYYIQRWPDRKACQITSFPHPYPQLASLQKEM
VRYQRKDGVQLTATLYLPPGYDPSRDGPLPCLLWSYPGEFKNKEAAGQVR
GSPNEYAILSGPTIPIIGEGKEEANDSYVEQLVGSAEAAVEEVIRRGVAH
PDKIAIGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNED
RTLWDATDTYIKMSPFMSANKIKKPILLIHGEEDNNSGTLTMQSDRFFNA
LKGHGALCRLVVLPFESHGYASRESIMHVLWETDRWLDKFCVSNSCSEEG
GSSEDKVIASGGVAAEADPDIGLDDDDSLHFTTRSSL


Reference
    Title: The genome sequence of the outbreeding globe artichoke constructed de novo incorporating a phase-aware low-pass sequencing strategy of F1 progeny
    Scaglione D, Reyes-Chin-Wo S, Acquadro A, Froenicke L, Portis E, Beitel C, Tirone M, Mauro R, Lo Monaco A and Lanteri S <5 more author(s)>
    Ref: Sci Rep, 6:19427, 2016 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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