Gene_Locus Report

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Gene_locus Report for: funhe-a0a147b2b4

Fundulus heteroclitus (Killifish) (Mummichog). Neuroligin-3

Comment
Other strains: Fundulus heteroclitus (Killifish) (Mummichog); Aphyosemion striatum; Nothobranchius furzeri (Turquoise killifish); Nothobranchius kadleci; Nothobranchius kadleci; Nothobranchius korthausae; Nothobranchius kuhntae (Beira killifish); Nothobranchius pienaari; Nothobranchius rachovii (bluefin notho); Nothobranchius furzeri (Turquoise killifish)


Relationship
Family|Neuroligin
Block| C
Position in NCBI Life Tree|Fundulus heteroclitus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Actinopterygii: N E > Actinopteri: N E > Neopterygii: N E > Teleostei: N E > Osteoglossocephalai: N E > Clupeocephala: N E > Euteleosteomorpha: N E > Neoteleostei: N E > Eurypterygia: N E > Ctenosquamata: N E > Acanthomorphata: N E > Euacanthomorphacea: N E > Percomorphaceae: N E > Ovalentaria: N E > Atherinomorphae: N E > Cyprinodontiformes: N E > Cyprinodontoidei: N E > Fundulidae: N E > Fundulus: N E > Fundulus heteroclitus: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: funhe-a0a147b2b4
Colored MSA for Neuroligin (raw)
MSELRTSRTVPPSSLSSPLGFPSLLLSLCFSLSLQPTSLLAEQTVPVVST
AQGRIRGILTPLPSDLLGPVIQYLGVPYARPPTGDRRFQAPEPPLPWPGI
RNVTQFAPVCPQSLDERSMLGDMMPSWLTANLDIAATYLTHQSEDCLYLN
IYVPTEEDIHEEGGQRPVMVYVHGGSYSEGTGNMMDGSVLASYGNVIVIT
LNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWVKENIAAFGGDPHRVTV
FGSGAGASCVSLLTLSHYSEDLFHRAIIQSGSALASWAVNYQPSKYAQQL
GERVGCGIEDSTQLVTCLQGRSFRELVEENITPAKYHTAFAPVIDGDVIP
DDPQILMEQGEFLNYDVMLGVNQGEGVKFVEGIVDSEDGVTAEDFDFAVS
DFVDSLYGYPEGRDTLRESIRFMYTDWADRDNAETRRKTLVALFTDHQWV
APAIATADLHAQYGSPTYFYSFYHHCQSEATPPWADSAHGDEVPYVFGVP
MVGPTDLFNCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTK
PNRFEEVAWSKYTPKEQLYLHIGLKPRVRDHYRATKISFWLQLVPHLHHV
NELLQSVSSFTHSPSPQDDTPYSYTKRLSKGWPPISTRHPGSQGGTPPPP
ESALGQDGGESGVRIPKEDYSTELSVTIAVGASLLFLNILAFAALLYKKD
KRRLEHRRPRPLPPPRRDITPADVAAHLQGEGLMSLQVKQLECDVASADE
RNNAHHHHTLDTLDALDGLDTQDIYSTLDTVRLTCPPDYTLTLRRSPDDV
PLMTSLTPGSLPVTPGSHPVTPATPMTPMTPGSVAGMRMGHPHQGYTHHS
PYSNTHLPHTHISAHTHSTTRV
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSELRTSRTVPPSSLSSPLGFPSLLLSLCFSLSLQPTSLLAEQTVPVVST
AQGRIRGILTPLPSDLLGPVIQYLGVPYARPPTGDRRFQAPEPPLPWPGI
RNVTQFAPVCPQSLDERSMLGDMMPSWLTANLDIAATYLTHQSEDCLYLN
IYVPTEEDIHEEGGQRPVMVYVHGGSYSEGTGNMMDGSVLASYGNVIVIT
LNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWVKENIAAFGGDPHRVTV
FGSGAGASCVSLLTLSHYSEDLFHRAIIQSGSALASWAVNYQPSKYAQQL
GERVGCGIEDSTQLVTCLQGRSFRELVEENITPAKYHTAFAPVIDGDVIP
DDPQILMEQGEFLNYDVMLGVNQGEGVKFVEGIVDSEDGVTAEDFDFAVS
DFVDSLYGYPEGRDTLRESIRFMYTDWADRDNAETRRKTLVALFTDHQWV
APAIATADLHAQYGSPTYFYSFYHHCQSEATPPWADSAHGDEVPYVFGVP
MVGPTDLFNCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTK
PNRFEEVAWSKYTPKEQLYLHIGLKPRVRDHYRATKISFWLQLVPHLHHV
NELLQSVSSFTHSPSPQDDTPYSYTKRLSKGWPPISTRHPGSQGGTPPPP
ESALGQDGGESGVRIPKEDYSTELSVTIAVGASLLFLNILAFAALLYKKD
KRRLEHRRPRPLPPPRRDITPADVAAHLQGEGLMSLQVKQLECDVASADE
RNNAHHHHTLDTLDALDGLDTQDIYSTLDTVRLTCPPDYTLTLRRSPDDV
PLMTSLTPGSLPVTPGSHPVTPATPMTPMTPGSVAGMRMGHPHQGYTHHS
PYSNTHLPHTHISAHTHSTTRV



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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