Gene_Locus Report

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Gene_locus Report for: janma-a6t0i5

Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis) Hydrolase

Relationship
Family|Haloacetate_dehalogenase
Block| X
Position in NCBI Life Tree|Janthinobacterium sp. Marseille
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Betaproteobacteria: N E > Burkholderiales: N E > Oxalobacteraceae: N E > Janthinobacterium: N E > Janthinobacterium sp. Marseille: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CP000269
1 UniProt : A6T0I5
1 UniProt : A6T0I5
1 Interpro : A6T0I5
1 Pfam : A6T0I5
1 PIRSF : A6T0I5
1 SUPERFAM : A6T0I5
Sequence
Graphical view for this peptide sequence: janma-a6t0i5
Colored MSA for Haloacetate_dehalogenase (raw)
MFAGFERHNAKVNGVNIAYIKGGQGPALLLLHGHPQTHVIWHKVADTLAQ
HYTVIASDLRGYGDSDKPQGLPDHSNYSKRVMGEDQIALMQQLGFEQFLL
MAHDRGGRVAYRMALDHPEVIRKLVILDVAPTLAMYEKANRAFATAYYHW
FFLTRPAPFPETLINSHPDVYLQHTIAGRSAGMKPFTPEAYAEYLRCLRD
PATIHGICEDYRASAGIDLEHERTDLAAGNKIQAPMLALWGKHGVIEQCF
QPLAEWQHLAANVRGHALDCGHYIPEDEPQLLLDEVLPFLAD
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MFAGFERHNAKVNGVNIAYIKGGQGPALLLLHGHPQTHVIWHKVADTLAQ
HYTVIASDLRGYGDSDKPQGLPDHSNYSKRVMGEDQIALMQQLGFEQFLL
MAHDRGGRVAYRMALDHPEVIRKLVILDVAPTLAMYEKANRAFATAYYHW
FFLTRPAPFPETLINSHPDVYLQHTIAGRSAGMKPFTPEAYAEYLRCLRD
PATIHGICEDYRASAGIDLEHERTDLAAGNKIQAPMLALWGKHGVIEQCF
QPLAEWQHLAANVRGHALDCGHYIPEDEPQLLLDEVLPFLAD


Reference
    Title: Genome analysis of Minibacterium massiliensis highlights the convergent evolution of water-living bacteria
    Audic S, Robert C, Campagna B, Parinello H, Claverie JM, Raoult D, Drancourt M
    Ref: PLoS Genet, 3:e138, 2007 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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