Gene_Locus Report

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Gene_locus Report for: lacac-q5fmq3

Lactobacillus acidophilus hypothetical protein

Comment
Other strains: Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM; ATCC 4796)


Relationship
Family|Duf_915
Block| X
Position in NCBI Life Tree|Lactobacillus acidophilus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Firmicutes: N E > Bacilli: N E > Lactobacillales: N E > Lactobacillaceae: N E > Lactobacillus: N E > Lactobacillus acidophilus: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CP000033
1 UniProt : Q5FMQ3
1 UniProt : Q5FMQ3
1 Interpro : Q5FMQ3
1 Pfam : Q5FMQ3
1 PIRSF : Q5FMQ3
1 SUPERFAM : Q5FMQ3
Sequence
Graphical view for this peptide sequence: lacac-q5fmq3
Colored MSA for Duf_915 (raw)
MFFNTKKYAEEAEKNNRHDLEQEPSMFNMISLGLIATFAPTRIFLKLHKR
HIENKAIIEKSTEKQVPIIYFHGFRGGDYTTNVMIQHATSDKGNKKFLKV
TVDLLGNFKLEGTWTGDKHPIVQVAFRQRIVGIYGIDYYLSFVLPFLSKR
YGFKNYIAVAHSLACPCIIRTEMKHYLSKSFPHLTKCALIAGPFNGVTYL
GDVPNVNLLNENGRPNMMNPHYLYLLFNRRKFNPNISVLNIYGNVLDNTN
TDKFISVVSAKSIRYILAPKAHFYQEVEVRGKNDAEHSWMHDNPFVIDIV
DKFLNLKK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MFFNTKKYAEEAEKNNRHDLEQEPSMFNMISLGLIATFAPTRIFLKLHKR
HIENKAIIEKSTEKQVPIIYFHGFRGGDYTTNVMIQHATSDKGNKKFLKV
TVDLLGNFKLEGTWTGDKHPIVQVAFRQRIVGIYGIDYYLSFVLPFLSKR
YGFKNYIAVAHSLACPCIIRTEMKHYLSKSFPHLTKCALIAGPFNGVTYL
GDVPNVNLLNENGRPNMMNPHYLYLLFNRRKFNPNISVLNIYGNVLDNTN
TDKFISVVSAKSIRYILAPKAHFYQEVEVRGKNDAEHSWMHDNPFVIDIV
DKFLNLKK


Reference
    Title: Complete genome sequence of the probiotic lactic acid bacterium Lactobacillus acidophilus NCFM
    Altermann E, Russell WM, Azcarate-Peril MA, Barrangou R, Buck BL, McAuliffe O, Souther N, Dobson A, Duong T and Klaenhammer TR <4 more author(s)>
    Ref: Proc Natl Acad Sci U S A, 102:3906, 2005 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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