Gene_Locus Report

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Gene_locus Report for: maize-a0a1d6kqc9

Zea mays (Maize). Uncharacterized conserved protein UCP031088 alpha/beta hydrolase

Relationship
Family|UCP031088
Block| X
Position in NCBI Life Tree|Zea mays
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > Liliopsida: N E > Petrosaviidae: N E > commelinids: N E > Poales: N E > Poaceae: N E > PACMAD clade: N E > Panicoideae: N E > Andropogonodae: N E > Andropogoneae: N E > Tripsacinae: N E > Zea: N E > Zea mays: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: maize-a0a1d6kqc9
Colored MSA for UCP031088 (raw)
MLLQPIPTATLAARPRSSEASFPFRCHRRRRVLLPVRADLTPISLSASAP
SRPAKPAVCTADELHYASVDGAGWRLALWRYRPPRNAPVRNHPLMLLSGV
GTNAVGFDLSPGASFARHMSSQGFDTWIVEVRGAGLSMREYDDSTPSGSV
TFEDVSSGIQPLNSTFEATSIQSSGGYASDCDDLGIVALDEPPLLAELSN
FFDRISKLMEEAVVNGNFHEITEKVSVLSEMVESSTIIGPVREESLRLLK
NFQDQLDSWERFVATQMDLTSEYNWDFDHYLEEDIPAALEYIKQHSRAKD
GKLLAIGHSMGGILLYAMLSRSELLCITISYLFFPTLQGFEGVSSNLAAI
VTLASSVDYTTSNSSLKLLLPLAHPAQALNVPAVPLGTLLAAAYPWASGP
PYLFSWLNPQISAQDMMHPELLAKLVSNNFCTVPAKVVLQLTTAFREGGL
CNRNGTFSYKDHLRECQTPVLALAGDKDLICPPDAVYETVKLIPNHKVDY
RVFGKPQGPHYAHYDLVGGRLAINEVYPCIIEFLSRHDGY
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MLLQPIPTATLAARPRSSEASFPFRCHRRRRVLLPVRADLTPISLSASAP
SRPAKPAVCTADELHYASVDGAGWRLALWRYRPPRNAPVRNHPLMLLSGV
GTNAVGFDLSPGASFARHMSSQGFDTWIVEVRGAGLSMREYDDSTPSGSV
TFEDVSSGIQPLNSTFEATSIQSSGGYASDCDDLGIVALDEPPLLAELSN
FFDRISKLMEEAVVNGNFHEITEKVSVLSEMVESSTIIGPVREESLRLLK
NFQDQLDSWERFVATQMDLTSEYNWDFDHYLEEDIPAALEYIKQHSRAKD
GKLLAIGHSMGGILLYAMLSRSELLCITISYLFFPTLQGFEGVSSNLAAI
VTLASSVDYTTSNSSLKLLLPLAHPAQALNVPAVPLGTLLAAAYPWASGP
PYLFSWLNPQISAQDMMHPELLAKLVSNNFCTVPAKVVLQLTTAFREGGL
CNRNGTFSYKDHLRECQTPVLALAGDKDLICPPDAVYETVKLIPNHKVDY
RVFGKPQGPHYAHYDLVGGRLAINEVYPCIIEFLSRHDGY


Reference
    Title: Extensive intraspecific gene order and gene structural variations between Mo17 and other maize genomes
    Sun S, Zhou Y, Chen J, Shi J, Zhao H, Song W, Zhang M, Cui Y, Dong X and Lai J <16 more author(s)>
    Ref: Nat Genet, 50:1289, 2018 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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