Gene_Locus Report

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Gene_locus Report for: orysa-Q8W3F1

Oryza sativa subsp. indica (Rice)OSJNBA0017E08.14 putative epoxide hydrolase

Relationship
Family|Epoxide_hydrolase
Block| X
Position in NCBI Life Tree|Oryza sativa
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > Liliopsida: N E > Petrosaviidae: N E > commelinids: N E > Poales: N E > Poaceae: N E > BOP clade: N E > Oryzoideae: N E > Oryzeae: N E > Oryzinae: N E > Oryza: N E > Oryza sativa: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
>3 Genbank links 2 more: AC068923, AE017109, AE016959
2 UniProt : B8BHP7, A0PFY0
3 UniProt : Q8W3F1, B8BHP7, A0PFY0
3 Interpro : Q8W3F1, B8BHP7, A0PFY0
3 Pfam : Q8W3F1, B8BHP7, A0PFY0
3 PIRSF : Q8W3F1, B8BHP7, A0PFY0
3 SUPERFAM : Q8W3F1, B8BHP7, A0PFY0
Sequence
Graphical view for this peptide sequence: orysa-Q8W3F1
Colored MSA for Epoxide_hydrolase (raw)
MDQRIEHSYLPIRGLKLHIAHIGKGEAATLLFVHGFPEVWYSWRHQMIAA
AAAGFRAIALDFPGYGLSEPPADLTQASWQGLMNDLLAILDSLSIPKVFL
VAKDFGVKPAYDLALCHPDRVCGIVSLGVPPLVESLSFSGLPEGFYIHRW
REPGRAEADFGRFDTRRILRTIYILFSRSEIPVAKQGQEIMDLADESTPM
PQWFTEEDLSAYTDLYEKSGLMTAIQIPYRTKAAKAEGANPRFEMPMFVI
MGQKDYILKFPALKEYMSSEKLKEIAPDYGITYIPEGSHFVQEQFPDLVN
QLVIDFVSKHA
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MDQRIEHSYLPIRGLKLHIAHIGKGEAATLLFVHGFPEVWYSWRHQMIAA
AAAGFRAIALDFPGYGLSEPPADLTQASWQGLMNDLLAILDSLSIPKVFL
VAKDFGVKPAYDLALCHPDRVCGIVSLGVPPLVESLSFSGLPEGFYIHRW
REPGRAEADFGRFDTRRILRTIYILFSRSEIPVAKQGQEIMDLADESTPM
PQWFTEEDLSAYTDLYEKSGLMTAIQIPYRTKAAKAEGANPRFEMPMFVI
MGQKDYILKFPALKEYMSSEKLKEIAPDYGITYIPEGSHFVQEQFPDLVN
QLVIDFVSKHA


Reference
    Title: In-depth view of structure, activity, and evolution of rice chromosome 10.
    Yu Y
    Ref: Science, 300:1566, 2003 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
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