Gene_Locus Report

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Gene_locus Report for: pig-i3ld92

Sus scrofa (Pig) Uncharacterized protein

Comment
no more in Uniprot but still in Ensembl ENSSSCP00000022021


Relationship
Family|Neuroligin
Block| C
Position in NCBI Life Tree|Sus scrofa
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Mammalia: N E > Theria: N E > Eutheria: N E > Boreoeutheria: N E > Laurasiatheria: N E > Cetartiodactyla: N E > Suina: N E > Suidae: N E > Sus: N E > Sus scrofa: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : FP565284
Sequence
Graphical view for this peptide sequence: pig-i3ld92
Colored MSA for Neuroligin (raw)
IWVLAASNPGPSPQQRGGGGPGGGGGGAPGGPGLGLSSLGEERFPVVNTA
YGRVRGVRRELNNEILGPVVQFLGVPYATPPLGARRFQPPEAPASWPGVR
NATTLPPACPQNLHGALPAIMLPVWFTDNLEAAATYVQNQSEDCLYLNLY
VPTEDGPLTKKRDEATLNPPDTDIRDSGKKPVMLFLHGGSYMEGTGNMFD
GSVLAAYGNVIVATLNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLSE
NIAHFGGDPERITIFGSGAGASCVNLLILSHHSEGLFQKAIAQSGTAISS
WSVNYQPLKYTRLLAAKVGCDREDSAEAVECLRRKPSRELVDQDVQPARY
HIAFGPVVDGDVVPDDPEILMQQGEFLNYDMLIGVNQGEGLKFVEDSAES
EDGVSASAFDFTVSNFVDNLYGYPEGKDVLRETIKFMYTDWADRDNGEMR
RKTLLALFTDHQWVAPAVATAKLHADYQSPVYFYTFYHHCQAEGRPEWAD
AAHGDELPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDP
NQPVPQDTKFIHTKPNRFEEVVWSKFNSKEKQYLHIGLKPRVRDNYRANK
VAFWLELVPHLHNLHTELFTTTTRLPPYATRWPPRPPPGAPGTRRPPPPA
TLPPEPEPEPGPRAYDRFPGDSRDYSTELSVTVAVGASLLFLNILAFAAL
YYKRDRRQELRCRRLSPPGGSGSGVPGGGPLLPAAGRELPPEEELVSLQL
KRGGGVGADPAEALRPACPPDYTLALRRAPDDVPLLAPGALTLLPSGLGP
PPPP
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

IWVLAASNPGPSPQQRGGGGPGGGGGGAPGGPGLGLSSLGEERFPVVNTA
YGRVRGVRRELNNEILGPVVQFLGVPYATPPLGARRFQPPEAPASWPGVR
NATTLPPACPQNLHGALPAIMLPVWFTDNLEAAATYVQNQSEDCLYLNLY
VPTEDGPLTKKRDEATLNPPDTDIRDSGKKPVMLFLHGGSYMEGTGNMFD
GSVLAAYGNVIVATLNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLSE
NIAHFGGDPERITIFGSGAGASCVNLLILSHHSEGLFQKAIAQSGTAISS
WSVNYQPLKYTRLLAAKVGCDREDSAEAVECLRRKPSRELVDQDVQPARY
HIAFGPVVDGDVVPDDPEILMQQGEFLNYDMLIGVNQGEGLKFVEDSAES
EDGVSASAFDFTVSNFVDNLYGYPEGKDVLRETIKFMYTDWADRDNGEMR
RKTLLALFTDHQWVAPAVATAKLHADYQSPVYFYTFYHHCQAEGRPEWAD
AAHGDELPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDP
NQPVPQDTKFIHTKPNRFEEVVWSKFNSKEKQYLHIGLKPRVRDNYRANK
VAFWLELVPHLHNLHTELFTTTTRLPPYATRWPPRPPPGAPGTRRPPPPA
TLPPEPEPEPGPRAYDRFPGDSRDYSTELSVTVAVGASLLFLNILAFAAL
YYKRDRRQELRCRRLSPPGGSGSGVPGGGPLLPAAGRELPPEEELVSLQL
KRGGGVGADPAEALRPACPPDYTLALRRAPDDVPLLAPGALTLLPSGLGP
PPPP



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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Acknowledgements and disclaimer