Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: rubgi-i0hu80

Rubrivivax gelatinosus (strain NBRC 100245 / IL144) Uncharacterized protein

Relationship
Family|BD-FAE
Block| H
Position in NCBI Life Tree|Rubrivivax gelatinosus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Betaproteobacteria: N E > Burkholderiales: N E > unclassified Burkholderiales: N E > Burkholderiales Genera incertae sedis: N E > Rubrivivax: N E > Rubrivivax gelatinosus: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AP012320
1 UniProt : I0HU80
1 UniProt : I0HU80
1 Interpro : I0HU80
1 Pfam : I0HU80
1 PIRSF : I0HU80
1 SUPERFAM : I0HU80
Sequence
Graphical view for this peptide sequence: rubgi-i0hu80
Colored MSA for BD-FAE (raw)
MPAFRRPALPVRASWPARRQALALLMAGAAGAAHAEGAGLMGLMRRLRGP
QGGEGELDRDDDAPGGVVLPAGARSELNLAYGDDPAQKLDVFIPAAGGER
RPVLLMVHGGAWMVGDKANRGVTAAKVARWLPRGWIVVSTNYRMDRQAPN
PLQQADDVARALAFVQQKAAGWGGDGERVLLMGHSAGAHLVALLAADARI
AERRGARPWLGTVALDSAALDVVQIMEGSHYRFYDRVFGKDPAVWRDNSP
YHRLAGTPRPMLLVCSSQRKESCGQAERFAAKVQAAGARAQVLPVDFNHG
GINAELGKDTRYTEQVEAFMKSLGLP
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPAFRRPALPVRASWPARRQALALLMAGAAGAAHAEGAGLMGLMRRLRGP
QGGEGELDRDDDAPGGVVLPAGARSELNLAYGDDPAQKLDVFIPAAGGER
RPVLLMVHGGAWMVGDKANRGVTAAKVARWLPRGWIVVSTNYRMDRQAPN
PLQQADDVARALAFVQQKAAGWGGDGERVLLMGHSAGAHLVALLAADARI
AERRGARPWLGTVALDSAALDVVQIMEGSHYRFYDRVFGKDPAVWRDNSP
YHRLAGTPRPMLLVCSSQRKESCGQAERFAAKVQAAGARAQVLPVDFNHG
GINAELGKDTRYTEQVEAFMKSLGLP



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer