Gene_locus Report for: solch-a0a0v0i330Solanum chacoense (Chaco potato), Solanum lycopersicum (Tomato), Solanum tuberosum (Potato), Putative uncharacterized protein Comment Other strains: Solanum chacoense (Chaco potato), Solanum lycopersicum (Tomato) (Lycopersicon esculentum), Solanum tuberosum (Potato) Relationship (Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > eudicotyledons: N E > Gunneridae: N E > Pentapetalae: N E > asterids: N E > lamiids: N E > Solanales: N E > Solanaceae: N E > Solanoideae: N E > Solaneae: N E > Solanum: N E > Solanum chacoense: N E Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)Solanum lycopersicum: N, E.
Lycopersicon esculentum: N, E.
Solanum tuberosum: N, E.
Molecular evidence | | Database | No mutation
No structure
No kinetic
No Substrate
No inhibitor
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Sequence Graphical view for this peptide sequence: solch-a0a0v0i330
Colored MSA for Duf_1350 (raw)
MNCVTAPKANWRCSPAISFYSDSTKYYNRSSIRFYPGNRKFSRIRCNLKD
TGSSSSSNNQPETSTGIQLYRDIERLLTETVKQSQDWGSSQDWDEIEGAW
VLQPKTSKPKLVVHFVGGVFVGAAPQLSYRLFLERLRQKDVLVIATPYAS
GFDHFYIADEVQFKFDRCLRFLQERVQDLPVFGIGHSLGSVIHLLIGARY
AVKRNGNVLMAFNNKDASLAVPLFSSVLVPMMQNFGPVLSQIASSPTIRL
GAEMTMKQIENLSPSIMKQVFPLVEQLTPLYTDLINGKENFTPRPEETQR
LIRSYYGISRNLLVKFKDDTIDETSTLAQVLSSGSAISSMLDMSIRTLPG
DHALPLQQALPNVPPGMTDAVNRSSELLANLTAGTPWENVTKEVGNTLGN
VDSIILNSGNSKDLDMLVETITSWMYSNTGPRLLQ
Legend
This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA
MNCVTAPKANWRCSPAISFYSDSTKYYNRSSIRFYPGNRKFSRIRCNLKD
TGSSSSSNNQPETSTGIQLYRDIERLLTETVKQSQDWGSSQDWDEIEGAW
VLQPKTSKPKLVVHFVGGVFVGAAPQLSYRLFLERLRQKDVLVIATPYAS
GFDHFYIADEVQFKFDRCLRFLQERVQDLPVFGIGHSLGSVIHLLIGARY
AVKRNGNVLMAFNNKDASLAVPLFSSVLVPMMQNFGPVLSQIASSPTIRL
GAEMTMKQIENLSPSIMKQVFPLVEQLTPLYTDLINGKENFTPRPEETQR
LIRSYYGISRNLLVKFKDDTIDETSTLAQVLSSGSAISSMLDMSIRTLPG
DHALPLQQALPNVPPGMTDAVNRSSELLANLTAGTPWENVTKEVGNTLGN
VDSIILNSGNSKDLDMLVETITSWMYSNTGPRLLQ
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