Gene_Locus Report

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Gene_locus Report for: solin-e9j2x4

Solenopsis invicta (Red imported fire ant) (Solenopsis wagneri) Putative uncharacterized protein

Relationship
Family|abh_upf0017
Block| X
Position in NCBI Life Tree|Solenopsis invicta
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Panarthropoda: N E > Arthropoda: N E > Mandibulata: N E > Pancrustacea: N E > Hexapoda: N E > Insecta: N E > Dicondylia: N E > Pterygota: N E > Neoptera: N E > Holometabola: N E > Hymenoptera: N E > Apocrita: N E > Aculeata: N E > Vespoidea: N E > Formicidae: N E > Myrmicinae: N E > Solenopsidini: N E > Solenopsis: N E > Solenopsis invicta: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : GL768054
1 UniProt : E9J2X4
1 UniProt : E9J2X4
1 Interpro : E9J2X4
1 Pfam : E9J2X4
1 PIRSF : E9J2X4
1 SUPERFAM : E9J2X4
Sequence
Graphical view for this peptide sequence: solin-e9j2x4
Colored MSA for abh_upf0017 (raw)
YKPTRLWGFSGHVQTIVHSIVGRVRCPWPIGERVYIGLPDGTTLTYDLYQ
PLTNGHEDDITIAICPGIGNSSESVYIRTFVHFVQCHGYRCAVLNHVGAL
SSVKITAPRIFSYGHTDDYNTMLQHLVEQHPNTRIVCIGYSLGGNLVTKY
LGERGSNKLPNIIGGISICQGYNALKGTKILLNWQNFRRFYLYVMTESMK
NLILKHKNMLLSEDVKQRCNLNERDIISAATLPELDEAYTRRVHNFRSVQ
ELYKWSSCLFYLDNVTTPMVFINALDDPLVPEVLLNPIKDHAANRLNTLY
IELAHGGHLGFYEGGLLYPNPITWLDRTLVSLVGSLTLAHADKALKA
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

YKPTRLWGFSGHVQTIVHSIVGRVRCPWPIGERVYIGLPDGTTLTYDLYQ
PLTNGHEDDITIAICPGIGNSSESVYIRTFVHFVQCHGYRCAVLNHVGAL
SSVKITAPRIFSYGHTDDYNTMLQHLVEQHPNTRIVCIGYSLGGNLVTKY
LGERGSNKLPNIIGGISICQGYNALKGTKILLNWQNFRRFYLYVMTESMK
NLILKHKNMLLSEDVKQRCNLNERDIISAATLPELDEAYTRRVHNFRSVQ
ELYKWSSCLFYLDNVTTPMVFINALDDPLVPEVLLNPIKDHAANRLNTLY
IELAHGGHLGFYEGGLLYPNPITWLDRTLVSLVGSLTLAHADKALKA


Reference
    Title: The genome of the fire ant Solenopsis invicta
    Wurm Y, Wang J, Riba-Grognuz O, Corona M, Nygaard S, Hunt BG, Ingram KK, Falquet L, Nipitwattanaphon M and Keller L <28 more author(s)>
    Ref: Proc Natl Acad Sci U S A, 108:5679, 2011 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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