Gene_Locus Report

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Gene_locus Report for: sollc-KAI2C

Solanum Lycopersicon (Tomato) (Lycopersicon esculentum) KAI2C Solyc02g092770

Relationship
Family|RsbQ-like
Block| X
Position in NCBI Life Tree|Solanum lycopersicum
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > eudicotyledons: N E > Gunneridae: N E > Pentapetalae: N E > asterids: N E > lamiids: N E > Solanales: N E > Solanaceae: N E > Solanoideae: N E > Solaneae: N E > Solanum: N E > Lycopersicon: N E > Solanum lycopersicum: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : XP_004231894
Sequence
Graphical view for this peptide sequence: sollc-KAI2C
Colored MSA for RsbQ-like (raw)
MGIVEEAHNVKILGTGDRSIVLAHGFGTDQSVWKHLVPHLVEDYKVVLFD
NMGAGTTNPDYFDFERYSTLEGYAYDVIAILEELQIPCCIYVGHSVSAMI
GAIASVARPDLFTKLVTVSGSPRYLNDVDYYGGFEQEDLDQLFEAMRSNY
KAWCSGFAPLAIGGDMDSVAVQEFSRTLFNMRPDMALSVLQIIFQSDLRH
MLPHVTVPCHIIQSMKDLAVPVVVSEYLHQNLGGESIVEVMSTDGHLPQL
SSPDVVIPVLLRHIRFDISVDK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MGIVEEAHNVKILGTGDRSIVLAHGFGTDQSVWKHLVPHLVEDYKVVLFD
NMGAGTTNPDYFDFERYSTLEGYAYDVIAILEELQIPCCIYVGHSVSAMI
GAIASVARPDLFTKLVTVSGSPRYLNDVDYYGGFEQEDLDQLFEAMRSNY
KAWCSGFAPLAIGGDMDSVAVQEFSRTLFNMRPDMALSVLQIIFQSDLRH
MLPHVTVPCHIIQSMKDLAVPVVVSEYLHQNLGGESIVEVMSTDGHLPQL
SSPDVVIPVLLRHIRFDISVDK



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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