Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: sphsa-q8gc44

Sphingobium fuliginis ATCC 27551 Meta-fission product hydrolase

Comment
Other strains: Flavobacterium sp. ATCC27551


Relationship
Family|6_AlphaBeta_hydrolase
Block| X
Position in NCBI Life Tree|Sphingobium fuliginis ATCC 27551
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)


Molecular evidence
Database
No mutation
No structure
No kinetic





3 substrates: HMMSA, HMSA, HODA-6-methyl
No inhibitor
Sequence
Graphical view for this peptide sequence: sphsa-q8gc44
Colored MSA for 6_AlphaBeta_hydrolase (raw)
MMAHARVHERFSLSVRKMHFRVVTPISSDIEAAFAWLGSDGAKRFHLDTK
RMIVAGNSAGGYLTLTTGYRVKPKPRALVALYGYGRLNAAWYSQPNLFPE
YNKTKITREEASAQSDGGVISDSSKRKGDADTIYRYYRQNGLWPQEVSGF
PSSSIAELIAQYEPAKNVTREYPPTLLMHGTDDHDVPYEESANMALQFEK
HGVPYVLKTIDRGGHGFGGGSPDQIEDAYRSMRDFIVRYLDGE
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MMAHARVHERFSLSVRKMHFRVVTPISSDIEAAFAWLGSDGAKRFHLDTK
RMIVAGNSAGGYLTLTTGYRVKPKPRALVALYGYGRLNAAWYSQPNLFPE
YNKTKITREEASAQSDGGVISDSSKRKGDADTIYRYYRQNGLWPQEVSGF
PSSSIAELIAQYEPAKNVTREYPPTLLMHGTDDHDVPYEESANMALQFEK
HGVPYVLKTIDRGGHGFGGGSPDQIEDAYRSMRDFIVRYLDGE


Reference
    Title: A novel meta-cleavage product hydrolase from Flavobacterium sp. ATCC27551
    Khajamohiddin S, Babu PS, Chakka D, Merrick M, Bhaduri A, Sowdhamini R, Siddavattam D
    Ref: Biochemical & Biophysical Research Communications, 351:675, 2006 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer